Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 MRRFP1-201ENST00000435941 1675 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 LARP1P1-201ENST00000407692 292 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 SOCS5P1-201ENST00000440415 949 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 RN7SL208P-201ENST00000577964 296 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AP001784.1-201ENST00000624107 428 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AC023421.1-201ENST00000590535 1785 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 AL136984.1-201ENST00000607611 1893 ntBASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RIMBP3Q9UFD9 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC002504.1-201ENST00000438281 691 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 GLUD1P2-201ENST00000583339 201 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC104785.1-201ENST00000603220 588 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 RPL12P48-201ENST00000605620 304 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 RNA5SP507-201ENST00000363603 121 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 RN7SKP59-201ENST00000410520 314 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 MIR378J-201ENST00000611988 109 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 AL136228.1-201ENST00000622221 319 ntBASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RIMBP3Q9UFD9 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 YES1P1-201ENST00000418510 1628 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 GSN-AS1-201ENST00000414544 4763 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AC096992.2-201ENST00000609553 1684 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms