RNA–Protein interactions for RNA: ENST00000410520.1

RN7SKP59-201, Transcript of RNA, 7SK small nuclear pseudogene 59, humanhuman

BASIC

Gene RN7SKP59, Length 314 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP59-201ENST00000410520 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
RN7SKP59-201ENST00000410520 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
RN7SKP59-201ENST00000410520 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
RN7SKP59-201ENST00000410520 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
RN7SKP59-201ENST00000410520 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
RN7SKP59-201ENST00000410520 FOXD1Q16676 465 aa14.55□□□□□ -0.08
RN7SKP59-201ENST00000410520 ADRA2BP18089 450 aa14.4□□□□□ -0.1
RN7SKP59-201ENST00000410520 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
RN7SKP59-201ENST00000410520 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
RN7SKP59-201ENST00000410520 NISCHQ9Y2I1 1504 aa13.86□□□□□ -0.19
RN7SKP59-201ENST00000410520 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
RN7SKP59-201ENST00000410520 KCNA4P22459 653 aa13.83□□□□□ -0.2
RN7SKP59-201ENST00000410520 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
RN7SKP59-201ENST00000410520 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
RN7SKP59-201ENST00000410520 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
RN7SKP59-201ENST00000410520 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
RN7SKP59-201ENST00000410520 MSH5O43196 834 aa13.22□□□□□ -0.29
RN7SKP59-201ENST00000410520 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
RN7SKP59-201ENST00000410520 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
RN7SKP59-201ENST00000410520 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
RN7SKP59-201ENST00000410520 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
RN7SKP59-201ENST00000410520 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
RN7SKP59-201ENST00000410520 ZBTB22O15209 634 aa12.73□□□□□ -0.37
RN7SKP59-201ENST00000410520 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP59-201ENST00000410520 ABCC9O60706 1549 aa12.7□□□□□ -0.38
RN7SKP59-201ENST00000410520 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
RN7SKP59-201ENST00000410520 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
RN7SKP59-201ENST00000410520 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
RN7SKP59-201ENST00000410520 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
RN7SKP59-201ENST00000410520 CCDC180Q9P1Z9 1646 aa12.53□□□□□ -0.4
RN7SKP59-201ENST00000410520 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
RN7SKP59-201ENST00000410520 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
RN7SKP59-201ENST00000410520 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
RN7SKP59-201ENST00000410520 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
RN7SKP59-201ENST00000410520 RB1CC1Q8TDY2 1594 aa11.99□□□□□ -0.49
RN7SKP59-201ENST00000410520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
RN7SKP59-201ENST00000410520 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
RN7SKP59-201ENST00000410520 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP59-201ENST00000410520 NACADO15069 1562 aa11.83□□□□□ -0.52
RN7SKP59-201ENST00000410520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP59-201ENST00000410520 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
RN7SKP59-201ENST00000410520 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP59-201ENST00000410520 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP59-201ENST00000410520 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
RN7SKP59-201ENST00000410520 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
RN7SKP59-201ENST00000410520 FKBP8Q14318 412 aa11.77□□□□□ -0.53
RN7SKP59-201ENST00000410520 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP59-201ENST00000410520 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
RN7SKP59-201ENST00000410520 APLP2Q06481 763 aa11.6□□□□□ -0.55
RN7SKP59-201ENST00000410520 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP59-201ENST00000410520 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP59-201ENST00000410520 MYO15BQ96JP2 1530 aa11.54□□□□□ -0.56
RN7SKP59-201ENST00000410520 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
RN7SKP59-201ENST00000410520 SCRIBQ14160 1630 aa11.51□□□□□ -0.57
RN7SKP59-201ENST00000410520 ZCCHC6Q5VYS8 1495 aaKnown RBP11.47□□□□□ -0.57
RN7SKP59-201ENST00000410520 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
RN7SKP59-201ENST00000410520 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
RN7SKP59-201ENST00000410520 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
RN7SKP59-201ENST00000410520 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
RN7SKP59-201ENST00000410520 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
RN7SKP59-201ENST00000410520 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP59-201ENST00000410520 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
RN7SKP59-201ENST00000410520 SHROOM4Q9ULL8 1493 aa11.36□□□□□ -0.59
RN7SKP59-201ENST00000410520 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP59-201ENST00000410520 CAPN15O75808 1086 aa11.31□□□□□ -0.6
RN7SKP59-201ENST00000410520 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
RN7SKP59-201ENST00000410520 FBLN2P98095 1184 aa11.29□□□□□ -0.6
RN7SKP59-201ENST00000410520 POLA2Q14181 598 aa11.28□□□□□ -0.6
RN7SKP59-201ENST00000410520 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
RN7SKP59-201ENST00000410520 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
RN7SKP59-201ENST00000410520 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
RN7SKP59-201ENST00000410520 PROM2Q8N271 834 aa11.16□□□□□ -0.62
RN7SKP59-201ENST00000410520 ABCB7O75027 752 aa11.15□□□□□ -0.62
RN7SKP59-201ENST00000410520 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
RN7SKP59-201ENST00000410520 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
RN7SKP59-201ENST00000410520 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
RN7SKP59-201ENST00000410520 DSG3P32926 999 aa10.99□□□□□ -0.65
RN7SKP59-201ENST00000410520 ERCC6Q03468 1493 aa10.99□□□□□ -0.65
RN7SKP59-201ENST00000410520 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
RN7SKP59-201ENST00000410520 CUX2O14529 1486 aa10.9□□□□□ -0.66
RN7SKP59-201ENST00000410520 POTEHQ6S545 545 aa10.9□□□□□ -0.66
RN7SKP59-201ENST00000410520 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
RN7SKP59-201ENST00000410520 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
RN7SKP59-201ENST00000410520 SMARCA4P51532 1647 aa10.89□□□□□ -0.67
RN7SKP59-201ENST00000410520 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 NESP48681 1621 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
RN7SKP59-201ENST00000410520 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
RN7SKP59-201ENST00000410520 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
RN7SKP59-201ENST00000410520 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
RN7SKP59-201ENST00000410520 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
RN7SKP59-201ENST00000410520 BAZ1AQ9NRL2 1556 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP59-201ENST00000410520 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
RN7SKP59-201ENST00000410520 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
RN7SKP59-201ENST00000410520 THOC2Q8NI27 1593 aaKnown RBP10.77□□□□□ -0.69
RN7SKP59-201ENST00000410520 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
RN7SKP59-201ENST00000410520 PKD2Q13563 968 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms