RNA–Protein interactions for RNA: ENST00000539362.1

AC130404.1-201, humanhuman

TSL 2 BASIC

Gene AC130404.1, Length 739 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC130404.1-201ENST00000539362 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
AC130404.1-201ENST00000539362 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
AC130404.1-201ENST00000539362 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
AC130404.1-201ENST00000539362 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
AC130404.1-201ENST00000539362 FOXD1Q16676 465 aa20.47■□□□□ 0.87
AC130404.1-201ENST00000539362 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
AC130404.1-201ENST00000539362 ADRA2BP18089 450 aa19.46■□□□□ 0.71
AC130404.1-201ENST00000539362 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
AC130404.1-201ENST00000539362 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
AC130404.1-201ENST00000539362 MSH5O43196 834 aa19.16■□□□□ 0.66
AC130404.1-201ENST00000539362 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
AC130404.1-201ENST00000539362 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
AC130404.1-201ENST00000539362 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
AC130404.1-201ENST00000539362 MAPK8IP2Q13387 824 aaPredicted RBP17.68■□□□□ 0.42
AC130404.1-201ENST00000539362 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
AC130404.1-201ENST00000539362 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
AC130404.1-201ENST00000539362 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
AC130404.1-201ENST00000539362 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
AC130404.1-201ENST00000539362 KCNA4P22459 653 aa17.12■□□□□ 0.33
AC130404.1-201ENST00000539362 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
AC130404.1-201ENST00000539362 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
AC130404.1-201ENST00000539362 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
AC130404.1-201ENST00000539362 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
AC130404.1-201ENST00000539362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
AC130404.1-201ENST00000539362 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
AC130404.1-201ENST00000539362 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
AC130404.1-201ENST00000539362 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
AC130404.1-201ENST00000539362 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
AC130404.1-201ENST00000539362 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
AC130404.1-201ENST00000539362 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
AC130404.1-201ENST00000539362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
AC130404.1-201ENST00000539362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
AC130404.1-201ENST00000539362 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
AC130404.1-201ENST00000539362 APLP2Q06481 763 aa15.91■□□□□ 0.14
AC130404.1-201ENST00000539362 MYCNP04198 464 aaPredicted RBP15.88■□□□□ 0.13
AC130404.1-201ENST00000539362 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
AC130404.1-201ENST00000539362 CAPN15O75808 1086 aa15.71■□□□□ 0.11
AC130404.1-201ENST00000539362 ZBTB22O15209 634 aa15.66■□□□□ 0.1
AC130404.1-201ENST00000539362 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
AC130404.1-201ENST00000539362 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
AC130404.1-201ENST00000539362 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
AC130404.1-201ENST00000539362 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
AC130404.1-201ENST00000539362 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
AC130404.1-201ENST00000539362 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
AC130404.1-201ENST00000539362 DSG3P32926 999 aa15.39■□□□□ 0.05
AC130404.1-201ENST00000539362 ABCB7O75027 752 aa15.31■□□□□ 0.04
AC130404.1-201ENST00000539362 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
AC130404.1-201ENST00000539362 POLA2Q14181 598 aa15.2■□□□□ 0.02
AC130404.1-201ENST00000539362 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
AC130404.1-201ENST00000539362 FBLN2P98095 1184 aa14.92□□□□□ -0.02
AC130404.1-201ENST00000539362 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
AC130404.1-201ENST00000539362 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
AC130404.1-201ENST00000539362 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
AC130404.1-201ENST00000539362 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
AC130404.1-201ENST00000539362 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
AC130404.1-201ENST00000539362 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
AC130404.1-201ENST00000539362 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
AC130404.1-201ENST00000539362 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
AC130404.1-201ENST00000539362 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
AC130404.1-201ENST00000539362 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
AC130404.1-201ENST00000539362 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
AC130404.1-201ENST00000539362 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
AC130404.1-201ENST00000539362 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
AC130404.1-201ENST00000539362 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
AC130404.1-201ENST00000539362 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
AC130404.1-201ENST00000539362 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
AC130404.1-201ENST00000539362 FKBP8Q14318 412 aa14.08□□□□□ -0.16
AC130404.1-201ENST00000539362 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
AC130404.1-201ENST00000539362 POTEHQ6S545 545 aa14.04□□□□□ -0.16
AC130404.1-201ENST00000539362 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
AC130404.1-201ENST00000539362 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
AC130404.1-201ENST00000539362 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
AC130404.1-201ENST00000539362 PROM2Q8N271 834 aa13.93□□□□□ -0.18
AC130404.1-201ENST00000539362 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
AC130404.1-201ENST00000539362 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
AC130404.1-201ENST00000539362 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
AC130404.1-201ENST00000539362 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
AC130404.1-201ENST00000539362 HAX1O00165 279 aa13.65□□□□□ -0.22
AC130404.1-201ENST00000539362 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
AC130404.1-201ENST00000539362 MIER1Q8N108 512 aa13.63□□□□□ -0.23
AC130404.1-201ENST00000539362 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
AC130404.1-201ENST00000539362 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
AC130404.1-201ENST00000539362 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
AC130404.1-201ENST00000539362 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
AC130404.1-201ENST00000539362 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
AC130404.1-201ENST00000539362 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
AC130404.1-201ENST00000539362 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
AC130404.1-201ENST00000539362 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
AC130404.1-201ENST00000539362 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
AC130404.1-201ENST00000539362 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
AC130404.1-201ENST00000539362 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
AC130404.1-201ENST00000539362 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
AC130404.1-201ENST00000539362 CLCN6P51797 869 aa13.31□□□□□ -0.28
AC130404.1-201ENST00000539362 EVX2Q03828 476 aa13.29□□□□□ -0.28
AC130404.1-201ENST00000539362 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
AC130404.1-201ENST00000539362 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
AC130404.1-201ENST00000539362 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
AC130404.1-201ENST00000539362 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
AC130404.1-201ENST00000539362 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
AC130404.1-201ENST00000539362 NUBP1P53384 320 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms