RNA–Protein interactions for RNA: ENST00000398983.2

AP004243.1-202, humanhuman

TSL 5 BASIC

Gene AP004243.1, Length 969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004243.1-202ENST00000398983 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
AP004243.1-202ENST00000398983 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
AP004243.1-202ENST00000398983 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
AP004243.1-202ENST00000398983 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
AP004243.1-202ENST00000398983 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
AP004243.1-202ENST00000398983 FOXD1Q16676 465 aa15.08■□□□□ 0
AP004243.1-202ENST00000398983 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
AP004243.1-202ENST00000398983 PPP6R1Q9UPN7 881 aa14.49□□□□□ -0.09
AP004243.1-202ENST00000398983 ADRA2BP18089 450 aa14.45□□□□□ -0.1
AP004243.1-202ENST00000398983 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
AP004243.1-202ENST00000398983 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
AP004243.1-202ENST00000398983 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
AP004243.1-202ENST00000398983 MSH5O43196 834 aa13.86□□□□□ -0.19
AP004243.1-202ENST00000398983 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
AP004243.1-202ENST00000398983 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
AP004243.1-202ENST00000398983 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
AP004243.1-202ENST00000398983 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
AP004243.1-202ENST00000398983 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
AP004243.1-202ENST00000398983 ABCC9O60706 1549 aa13.1□□□□□ -0.31
AP004243.1-202ENST00000398983 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
AP004243.1-202ENST00000398983 NACADO15069 1562 aa13.07□□□□□ -0.32
AP004243.1-202ENST00000398983 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
AP004243.1-202ENST00000398983 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
AP004243.1-202ENST00000398983 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
AP004243.1-202ENST00000398983 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
AP004243.1-202ENST00000398983 KCNA4P22459 653 aa12.89□□□□□ -0.35
AP004243.1-202ENST00000398983 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
AP004243.1-202ENST00000398983 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
AP004243.1-202ENST00000398983 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
AP004243.1-202ENST00000398983 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
AP004243.1-202ENST00000398983 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
AP004243.1-202ENST00000398983 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
AP004243.1-202ENST00000398983 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
AP004243.1-202ENST00000398983 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
AP004243.1-202ENST00000398983 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
AP004243.1-202ENST00000398983 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
AP004243.1-202ENST00000398983 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
AP004243.1-202ENST00000398983 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
AP004243.1-202ENST00000398983 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
AP004243.1-202ENST00000398983 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
AP004243.1-202ENST00000398983 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
AP004243.1-202ENST00000398983 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
AP004243.1-202ENST00000398983 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
AP004243.1-202ENST00000398983 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
AP004243.1-202ENST00000398983 SLC4A1APQ9BWU0 796 aaKnown RBP12.21□□□□□ -0.45
AP004243.1-202ENST00000398983 WIZO95785 1651 aa12.21□□□□□ -0.45
AP004243.1-202ENST00000398983 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
AP004243.1-202ENST00000398983 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
AP004243.1-202ENST00000398983 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
AP004243.1-202ENST00000398983 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
AP004243.1-202ENST00000398983 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
AP004243.1-202ENST00000398983 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
AP004243.1-202ENST00000398983 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
AP004243.1-202ENST00000398983 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
AP004243.1-202ENST00000398983 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
AP004243.1-202ENST00000398983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
AP004243.1-202ENST00000398983 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
AP004243.1-202ENST00000398983 RNF39Q9H2S5 420 aa11.92□□□□□ -0.5
AP004243.1-202ENST00000398983 CC2D2AQ9P2K1 1620 aa11.91□□□□□ -0.5
AP004243.1-202ENST00000398983 ZBTB22O15209 634 aa11.9□□□□□ -0.5
AP004243.1-202ENST00000398983 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
AP004243.1-202ENST00000398983 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
AP004243.1-202ENST00000398983 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
AP004243.1-202ENST00000398983 CFTRP13569 1480 aa11.76□□□□□ -0.53
AP004243.1-202ENST00000398983 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
AP004243.1-202ENST00000398983 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
AP004243.1-202ENST00000398983 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
AP004243.1-202ENST00000398983 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
AP004243.1-202ENST00000398983 MYCNP04198 464 aaPredicted RBP11.7□□□□□ -0.54
AP004243.1-202ENST00000398983 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
AP004243.1-202ENST00000398983 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
AP004243.1-202ENST00000398983 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
AP004243.1-202ENST00000398983 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
AP004243.1-202ENST00000398983 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
AP004243.1-202ENST00000398983 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
AP004243.1-202ENST00000398983 EEA1Q15075 1411 aa11.62□□□□□ -0.55
AP004243.1-202ENST00000398983 BIVM-ERCC5R4GMW8 1640 aa11.62□□□□□ -0.55
AP004243.1-202ENST00000398983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
AP004243.1-202ENST00000398983 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
AP004243.1-202ENST00000398983 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
AP004243.1-202ENST00000398983 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
AP004243.1-202ENST00000398983 CUX1P39880 1505 aa11.55□□□□□ -0.56
AP004243.1-202ENST00000398983 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
AP004243.1-202ENST00000398983 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
AP004243.1-202ENST00000398983 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
AP004243.1-202ENST00000398983 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
AP004243.1-202ENST00000398983 NESP48681 1621 aa11.49□□□□□ -0.57
AP004243.1-202ENST00000398983 SOGA1O94964 1423 aa11.49□□□□□ -0.57
AP004243.1-202ENST00000398983 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
AP004243.1-202ENST00000398983 CAPN15O75808 1086 aa11.46□□□□□ -0.57
AP004243.1-202ENST00000398983 APLP2Q06481 763 aa11.44□□□□□ -0.58
AP004243.1-202ENST00000398983 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
AP004243.1-202ENST00000398983 KIF21BO75037 1637 aa11.43□□□□□ -0.58
AP004243.1-202ENST00000398983 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
AP004243.1-202ENST00000398983 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
AP004243.1-202ENST00000398983 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
AP004243.1-202ENST00000398983 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
AP004243.1-202ENST00000398983 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
AP004243.1-202ENST00000398983 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.58
AP004243.1-202ENST00000398983 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms