Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC007684.1-201ENST00000609671 477 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 RNVU1-19-201ENST00000613023 167 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC100793.4-201ENST00000613683 429 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC026368.1-201ENST00000614934 690 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC010133.1-201ENST00000615809 842 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC005840.5-201ENST00000619166 599 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 ZNF252P-208ENST00000592792 2485 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AP001527.1-201ENST00000566440 1957 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 ANKRD20A5P-201ENST00000431648 3556 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.13□□□□□ -0.95
ALDH1A1P00352 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 XRCC6P3-201ENST00000422187 1621 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 AC010997.6-201ENST00000623230 1645 ntBASIC9.13□□□□□ -0.95
ALDH1A1P00352 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
ALDH1A1P00352 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 MTCO1P6-201ENST00000481192 1384 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 SOCS5P4-201ENST00000454743 1566 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 OR5M2P-202ENST00000641241 4242 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC006210.2-201ENST00000367074 1545 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 RN7SKP63-201ENST00000363187 301 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RNU6-83P-201ENST00000384568 112 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AL136310.1-201ENST00000404926 654 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 SNORA11D-201ENST00000408548 128 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 SNORA11E-201ENST00000408778 128 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 GAS8-AS1-201ENST00000408886 435 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RN7SKP221-201ENST00000410420 301 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RN7SKP131-201ENST00000410698 301 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RNU2-41P-201ENST00000410991 178 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RPL21P107-201ENST00000411449 460 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 PGAM1P3-201ENST00000420790 565 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC245054.1-201ENST00000420944 258 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 NPM1P51-201ENST00000443470 744 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 RPL7P45-201ENST00000455851 743 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RN7SL741P-201ENST00000482473 289 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 OR9A1P-202ENST00000484361 945 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 Y_RNA.695-201ENST00000516715 107 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AP001317.1-201ENST00000531194 960 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 OR8L1P-201ENST00000534005 955 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 MIR3915-201ENST00000578518 97 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 FGF7P1-201ENST00000582820 288 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC091946.2-201ENST00000606105 291 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 AC093838.1-201ENST00000613014 469 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RBM12B-AS1-201ENST00000623283 653 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 AKR1D1-201ENST00000242375 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 CR381670.1-201ENST00000624291 1693 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
ALDH1A1P00352 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC9.12□□□□□ -0.95
ALDH1A1P00352 EEF1A1P5-201ENST00000436459 1389 ntBASIC9.12□□□□□ -0.95
ALDH1A1P00352 IL15-207ENST00000514653 1388 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms