RNA–Protein interactions for RNA: ENST00000527345.1

AP002428.1-201, humanhuman

TSL 3 BASIC

Gene AP002428.1, Length 380 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002428.1-201ENST00000527345 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
AP002428.1-201ENST00000527345 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
AP002428.1-201ENST00000527345 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
AP002428.1-201ENST00000527345 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
AP002428.1-201ENST00000527345 FOXD1Q16676 465 aa19.53■□□□□ 0.72
AP002428.1-201ENST00000527345 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
AP002428.1-201ENST00000527345 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
AP002428.1-201ENST00000527345 ADRA2BP18089 450 aa18.49■□□□□ 0.55
AP002428.1-201ENST00000527345 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
AP002428.1-201ENST00000527345 MSH5O43196 834 aa18.18■□□□□ 0.5
AP002428.1-201ENST00000527345 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
AP002428.1-201ENST00000527345 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
AP002428.1-201ENST00000527345 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
AP002428.1-201ENST00000527345 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
AP002428.1-201ENST00000527345 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
AP002428.1-201ENST00000527345 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
AP002428.1-201ENST00000527345 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
AP002428.1-201ENST00000527345 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
AP002428.1-201ENST00000527345 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
AP002428.1-201ENST00000527345 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
AP002428.1-201ENST00000527345 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
AP002428.1-201ENST00000527345 KCNA4P22459 653 aa16.03■□□□□ 0.16
AP002428.1-201ENST00000527345 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
AP002428.1-201ENST00000527345 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
AP002428.1-201ENST00000527345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
AP002428.1-201ENST00000527345 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
AP002428.1-201ENST00000527345 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
AP002428.1-201ENST00000527345 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
AP002428.1-201ENST00000527345 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
AP002428.1-201ENST00000527345 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
AP002428.1-201ENST00000527345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
AP002428.1-201ENST00000527345 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
AP002428.1-201ENST00000527345 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
AP002428.1-201ENST00000527345 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
AP002428.1-201ENST00000527345 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
AP002428.1-201ENST00000527345 CAPN15O75808 1086 aa14.83□□□□□ -0.04
AP002428.1-201ENST00000527345 APLP2Q06481 763 aa14.83□□□□□ -0.04
AP002428.1-201ENST00000527345 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
AP002428.1-201ENST00000527345 ZBTB22O15209 634 aa14.71□□□□□ -0.05
AP002428.1-201ENST00000527345 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
AP002428.1-201ENST00000527345 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
AP002428.1-201ENST00000527345 DSG3P32926 999 aa14.65□□□□□ -0.06
AP002428.1-201ENST00000527345 ABCB7O75027 752 aa14.49□□□□□ -0.09
AP002428.1-201ENST00000527345 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
AP002428.1-201ENST00000527345 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
AP002428.1-201ENST00000527345 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
AP002428.1-201ENST00000527345 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
AP002428.1-201ENST00000527345 POLA2Q14181 598 aa14.37□□□□□ -0.11
AP002428.1-201ENST00000527345 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
AP002428.1-201ENST00000527345 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
AP002428.1-201ENST00000527345 FBLN2P98095 1184 aa13.91□□□□□ -0.18
AP002428.1-201ENST00000527345 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
AP002428.1-201ENST00000527345 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
AP002428.1-201ENST00000527345 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
AP002428.1-201ENST00000527345 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
AP002428.1-201ENST00000527345 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
AP002428.1-201ENST00000527345 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
AP002428.1-201ENST00000527345 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
AP002428.1-201ENST00000527345 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
AP002428.1-201ENST00000527345 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
AP002428.1-201ENST00000527345 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
AP002428.1-201ENST00000527345 POTEHQ6S545 545 aa13.51□□□□□ -0.25
AP002428.1-201ENST00000527345 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
AP002428.1-201ENST00000527345 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
AP002428.1-201ENST00000527345 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
AP002428.1-201ENST00000527345 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
AP002428.1-201ENST00000527345 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
AP002428.1-201ENST00000527345 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
AP002428.1-201ENST00000527345 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
AP002428.1-201ENST00000527345 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
AP002428.1-201ENST00000527345 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
AP002428.1-201ENST00000527345 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
AP002428.1-201ENST00000527345 PROM2Q8N271 834 aa13.05□□□□□ -0.32
AP002428.1-201ENST00000527345 FKBP8Q14318 412 aa13.02□□□□□ -0.33
AP002428.1-201ENST00000527345 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
AP002428.1-201ENST00000527345 HAX1O00165 279 aa12.98□□□□□ -0.33
AP002428.1-201ENST00000527345 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
AP002428.1-201ENST00000527345 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
AP002428.1-201ENST00000527345 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
AP002428.1-201ENST00000527345 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
AP002428.1-201ENST00000527345 EVX2Q03828 476 aa12.8□□□□□ -0.36
AP002428.1-201ENST00000527345 MIER1Q8N108 512 aa12.73□□□□□ -0.37
AP002428.1-201ENST00000527345 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
AP002428.1-201ENST00000527345 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
AP002428.1-201ENST00000527345 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
AP002428.1-201ENST00000527345 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
AP002428.1-201ENST00000527345 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
AP002428.1-201ENST00000527345 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
AP002428.1-201ENST00000527345 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
AP002428.1-201ENST00000527345 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
AP002428.1-201ENST00000527345 GABBR2O75899 941 aa12.56□□□□□ -0.4
AP002428.1-201ENST00000527345 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
AP002428.1-201ENST00000527345 CLCN6P51797 869 aa12.52□□□□□ -0.41
AP002428.1-201ENST00000527345 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
AP002428.1-201ENST00000527345 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
AP002428.1-201ENST00000527345 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
AP002428.1-201ENST00000527345 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
AP002428.1-201ENST00000527345 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
AP002428.1-201ENST00000527345 NUBP1P53384 320 aa12.4□□□□□ -0.42
AP002428.1-201ENST00000527345 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms