RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
GPN1-210ENST00000515877 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
GPN1-210ENST00000515877 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
GPN1-210ENST00000515877 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
GPN1-210ENST00000515877 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
GPN1-210ENST00000515877 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
GPN1-210ENST00000515877 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
GPN1-210ENST00000515877 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
GPN1-210ENST00000515877 KCNA4P22459 653 aa16.21■□□□□ 0.19
GPN1-210ENST00000515877 ADRA2BP18089 450 aa16.08■□□□□ 0.16
GPN1-210ENST00000515877 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
GPN1-210ENST00000515877 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
GPN1-210ENST00000515877 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
GPN1-210ENST00000515877 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
GPN1-210ENST00000515877 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
GPN1-210ENST00000515877 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
GPN1-210ENST00000515877 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
GPN1-210ENST00000515877 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
GPN1-210ENST00000515877 FOXD1Q16676 465 aa15.45■□□□□ 0.06
GPN1-210ENST00000515877 ABCC9O60706 1549 aa15.43■□□□□ 0.06
GPN1-210ENST00000515877 NACADO15069 1562 aa15.38■□□□□ 0.05
GPN1-210ENST00000515877 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
GPN1-210ENST00000515877 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
GPN1-210ENST00000515877 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
GPN1-210ENST00000515877 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
GPN1-210ENST00000515877 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
GPN1-210ENST00000515877 NPM3O75607 178 aaKnown RBP15.02□□□□□ -0.01
GPN1-210ENST00000515877 SUPT5HO00267 1087 aaKnown RBP14.95□□□□□ -0.02
GPN1-210ENST00000515877 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
GPN1-210ENST00000515877 ZBTB22O15209 634 aa14.93□□□□□ -0.02
GPN1-210ENST00000515877 AMER1Q5JTC6 1135 aaPredicted RBP14.88□□□□□ -0.03
GPN1-210ENST00000515877 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
GPN1-210ENST00000515877 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
GPN1-210ENST00000515877 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
GPN1-210ENST00000515877 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
GPN1-210ENST00000515877 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
GPN1-210ENST00000515877 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
GPN1-210ENST00000515877 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
GPN1-210ENST00000515877 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
GPN1-210ENST00000515877 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
GPN1-210ENST00000515877 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
GPN1-210ENST00000515877 WIZO95785 1651 aa14.55□□□□□ -0.08
GPN1-210ENST00000515877 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.08
GPN1-210ENST00000515877 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
GPN1-210ENST00000515877 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
GPN1-210ENST00000515877 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
GPN1-210ENST00000515877 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
GPN1-210ENST00000515877 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
GPN1-210ENST00000515877 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
GPN1-210ENST00000515877 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
GPN1-210ENST00000515877 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
GPN1-210ENST00000515877 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
GPN1-210ENST00000515877 FKBP8Q14318 412 aa14.19□□□□□ -0.14
GPN1-210ENST00000515877 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
GPN1-210ENST00000515877 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
GPN1-210ENST00000515877 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
GPN1-210ENST00000515877 RNF216Q9NWF9 866 aaPredicted RBP14.08□□□□□ -0.15
GPN1-210ENST00000515877 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.17
GPN1-210ENST00000515877 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
GPN1-210ENST00000515877 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
GPN1-210ENST00000515877 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
GPN1-210ENST00000515877 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
GPN1-210ENST00000515877 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
GPN1-210ENST00000515877 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
GPN1-210ENST00000515877 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
GPN1-210ENST00000515877 CFTRP13569 1480 aa13.86□□□□□ -0.19
GPN1-210ENST00000515877 MSH5O43196 834 aa13.85□□□□□ -0.19
GPN1-210ENST00000515877 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
GPN1-210ENST00000515877 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
GPN1-210ENST00000515877 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
GPN1-210ENST00000515877 EEA1Q15075 1411 aa13.81□□□□□ -0.2
GPN1-210ENST00000515877 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
GPN1-210ENST00000515877 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.2
GPN1-210ENST00000515877 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
GPN1-210ENST00000515877 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
GPN1-210ENST00000515877 SOGA1O94964 1423 aa13.7□□□□□ -0.22
GPN1-210ENST00000515877 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
GPN1-210ENST00000515877 CUX1P39880 1505 aa13.69□□□□□ -0.22
GPN1-210ENST00000515877 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
GPN1-210ENST00000515877 RUSC2Q8N2Y8 1516 aa13.64□□□□□ -0.23
GPN1-210ENST00000515877 FANCD2Q9BXW9 1451 aa13.63□□□□□ -0.23
GPN1-210ENST00000515877 KIF21BO75037 1637 aa13.63□□□□□ -0.23
GPN1-210ENST00000515877 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
GPN1-210ENST00000515877 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
GPN1-210ENST00000515877 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
GPN1-210ENST00000515877 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
GPN1-210ENST00000515877 NESP48681 1621 aa13.57□□□□□ -0.24
GPN1-210ENST00000515877 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
GPN1-210ENST00000515877 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
GPN1-210ENST00000515877 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
GPN1-210ENST00000515877 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.24
GPN1-210ENST00000515877 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
GPN1-210ENST00000515877 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
GPN1-210ENST00000515877 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
GPN1-210ENST00000515877 BCANQ96GW7 911 aa13.5□□□□□ -0.25
GPN1-210ENST00000515877 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
GPN1-210ENST00000515877 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
GPN1-210ENST00000515877 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
GPN1-210ENST00000515877 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
GPN1-210ENST00000515877 CUX2O14529 1486 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms