RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
CACNB4-239ENST00000636947 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
CACNB4-239ENST00000636947 NISCHQ9Y2I1 1504 aa13.41□□□□□ -0.26
CACNB4-239ENST00000636947 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
CACNB4-239ENST00000636947 APLP2Q06481 763 aa13□□□□□ -0.33
CACNB4-239ENST00000636947 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
CACNB4-239ENST00000636947 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
CACNB4-239ENST00000636947 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
CACNB4-239ENST00000636947 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
CACNB4-239ENST00000636947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
CACNB4-239ENST00000636947 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
CACNB4-239ENST00000636947 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.4
CACNB4-239ENST00000636947 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
CACNB4-239ENST00000636947 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
CACNB4-239ENST00000636947 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
CACNB4-239ENST00000636947 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
CACNB4-239ENST00000636947 ABCC9O60706 1549 aa12.27□□□□□ -0.45
CACNB4-239ENST00000636947 FBLN2P98095 1184 aa12.24□□□□□ -0.45
CACNB4-239ENST00000636947 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
CACNB4-239ENST00000636947 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
CACNB4-239ENST00000636947 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
CACNB4-239ENST00000636947 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACNB4-239ENST00000636947 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
CACNB4-239ENST00000636947 BCANQ96GW7 911 aa12.07□□□□□ -0.48
CACNB4-239ENST00000636947 CENPBP07199 599 aaPredicted RBP12.02□□□□□ -0.49
CACNB4-239ENST00000636947 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
CACNB4-239ENST00000636947 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
CACNB4-239ENST00000636947 MYT1Q01538 1121 aa11.95□□□□□ -0.5
CACNB4-239ENST00000636947 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
CACNB4-239ENST00000636947 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
CACNB4-239ENST00000636947 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
CACNB4-239ENST00000636947 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
CACNB4-239ENST00000636947 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
CACNB4-239ENST00000636947 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
CACNB4-239ENST00000636947 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
CACNB4-239ENST00000636947 AEBP2Q6ZN18 517 aaPredicted RBP11.78□□□□□ -0.52
CACNB4-239ENST00000636947 ITGAEP38570 1179 aa11.76□□□□□ -0.53
CACNB4-239ENST00000636947 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
CACNB4-239ENST00000636947 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
CACNB4-239ENST00000636947 NEFLP07196 543 aa11.68□□□□□ -0.54
CACNB4-239ENST00000636947 ARID4BQ4LE39 1312 aaPredicted RBP11.64□□□□□ -0.55
CACNB4-239ENST00000636947 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
CACNB4-239ENST00000636947 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
CACNB4-239ENST00000636947 HRCP23327 699 aa11.62□□□□□ -0.55
CACNB4-239ENST00000636947 NEFMP07197 916 aa11.61□□□□□ -0.55
CACNB4-239ENST00000636947 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
CACNB4-239ENST00000636947 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
CACNB4-239ENST00000636947 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
CACNB4-239ENST00000636947 FAM50AQ14320 339 aaKnown RBP11.57□□□□□ -0.56
CACNB4-239ENST00000636947 A0A0G2JS52 829 aa11.55□□□□□ -0.56
CACNB4-239ENST00000636947 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
CACNB4-239ENST00000636947 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
CACNB4-239ENST00000636947 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
CACNB4-239ENST00000636947 ARID3CA6NKF2 412 aa11.54□□□□□ -0.56
CACNB4-239ENST00000636947 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
CACNB4-239ENST00000636947 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.56
CACNB4-239ENST00000636947 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
CACNB4-239ENST00000636947 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
CACNB4-239ENST00000636947 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
CACNB4-239ENST00000636947 PPP1R15AO75807 674 aaPredicted RBP11.44□□□□□ -0.58
CACNB4-239ENST00000636947 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
CACNB4-239ENST00000636947 P3H3Q8IVL6 736 aa11.4□□□□□ -0.58
CACNB4-239ENST00000636947 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
CACNB4-239ENST00000636947 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
CACNB4-239ENST00000636947 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
CACNB4-239ENST00000636947 RB1CC1Q8TDY2 1594 aa11.32□□□□□ -0.6
CACNB4-239ENST00000636947 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
CACNB4-239ENST00000636947 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
CACNB4-239ENST00000636947 TSPY4P0CV99 314 aa11.29□□□□□ -0.6
CACNB4-239ENST00000636947 TSPY10P0CW01 314 aa11.29□□□□□ -0.6
CACNB4-239ENST00000636947 LOC105371045A0A1W2PR82 267 aa11.29□□□□□ -0.6
CACNB4-239ENST00000636947 CLSPNQ9HAW4 1339 aa11.27□□□□□ -0.6
CACNB4-239ENST00000636947 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
CACNB4-239ENST00000636947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.616e-7■■■■■ 26.8
CACNB4-239ENST00000636947 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
CACNB4-239ENST00000636947 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
CACNB4-239ENST00000636947 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
CACNB4-239ENST00000636947 NPHP1O15259 732 aa11.22□□□□□ -0.61
CACNB4-239ENST00000636947 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
CACNB4-239ENST00000636947 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
CACNB4-239ENST00000636947 FOXD1Q16676 465 aa11.21□□□□□ -0.61
CACNB4-239ENST00000636947 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
CACNB4-239ENST00000636947 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
CACNB4-239ENST00000636947 CANXP27824 592 aaKnown RBP11.17□□□□□ -0.62
CACNB4-239ENST00000636947 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
CACNB4-239ENST00000636947 MLECQ14165 292 aa11.15□□□□□ -0.62
CACNB4-239ENST00000636947 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
CACNB4-239ENST00000636947 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
CACNB4-239ENST00000636947 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
CACNB4-239ENST00000636947 ARXQ96QS3 562 aa11.11□□□□□ -0.63
CACNB4-239ENST00000636947 CCDC9Q9Y3X0 531 aaKnown RBP11.08□□□□□ -0.64
CACNB4-239ENST00000636947 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
CACNB4-239ENST00000636947 MEX3CQ5U5Q3 659 aaKnown RBP11.04□□□□□ -0.64
CACNB4-239ENST00000636947 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
CACNB4-239ENST00000636947 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
CACNB4-239ENST00000636947 ACIN1Q9UKV3 1341 aaKnown RBP11□□□□□ -0.65
CACNB4-239ENST00000636947 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
CACNB4-239ENST00000636947 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
CACNB4-239ENST00000636947 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
CACNB4-239ENST00000636947 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms