RNA–Protein interactions for RNA: ENST00000638394.1

PRICKLE2-205, Transcript of prickle planar cell polarity protein 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRICKLE2, Length 9,956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-205ENST00000638394 MYT1Q01538 1121 aa15.61■□□□□ 0.09
PRICKLE2-205ENST00000638394 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
PRICKLE2-205ENST00000638394 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
PRICKLE2-205ENST00000638394 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
PRICKLE2-205ENST00000638394 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
PRICKLE2-205ENST00000638394 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.12
PRICKLE2-205ENST00000638394 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
PRICKLE2-205ENST00000638394 YTHDC1Q96MU7 727 aaKnown RBP13.99□□□□□ -0.17
PRICKLE2-205ENST00000638394 ERICH6Q7L0X2 663 aa13.95□□□□□ -0.18
PRICKLE2-205ENST00000638394 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
PRICKLE2-205ENST00000638394 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
PRICKLE2-205ENST00000638394 APLP2Q06481 763 aa13.7□□□□□ -0.22
PRICKLE2-205ENST00000638394 NEFLP07196 543 aa13.61□□□□□ -0.23
PRICKLE2-205ENST00000638394 HRCP23327 699 aa13.59□□□□□ -0.23
PRICKLE2-205ENST00000638394 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
PRICKLE2-205ENST00000638394 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
PRICKLE2-205ENST00000638394 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
PRICKLE2-205ENST00000638394 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
PRICKLE2-205ENST00000638394 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
PRICKLE2-205ENST00000638394 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
PRICKLE2-205ENST00000638394 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
PRICKLE2-205ENST00000638394 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
PRICKLE2-205ENST00000638394 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
PRICKLE2-205ENST00000638394 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
PRICKLE2-205ENST00000638394 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
PRICKLE2-205ENST00000638394 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
PRICKLE2-205ENST00000638394 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
PRICKLE2-205ENST00000638394 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
PRICKLE2-205ENST00000638394 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
PRICKLE2-205ENST00000638394 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.35
PRICKLE2-205ENST00000638394 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
PRICKLE2-205ENST00000638394 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
PRICKLE2-205ENST00000638394 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
PRICKLE2-205ENST00000638394 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.38
PRICKLE2-205ENST00000638394 CHIC1Q5VXU3 224 aa12.7□□□□□ -0.38
PRICKLE2-205ENST00000638394 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
PRICKLE2-205ENST00000638394 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
PRICKLE2-205ENST00000638394 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
PRICKLE2-205ENST00000638394 ANP32CO43423 234 aa12.56□□□□□ -0.4
PRICKLE2-205ENST00000638394 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
PRICKLE2-205ENST00000638394 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
PRICKLE2-205ENST00000638394 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
PRICKLE2-205ENST00000638394 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
PRICKLE2-205ENST00000638394 ERICH6BQ5W0A0 696 aa12.49□□□□□ -0.41
PRICKLE2-205ENST00000638394 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
PRICKLE2-205ENST00000638394 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
PRICKLE2-205ENST00000638394 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
PRICKLE2-205ENST00000638394 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
PRICKLE2-205ENST00000638394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
PRICKLE2-205ENST00000638394 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
PRICKLE2-205ENST00000638394 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
PRICKLE2-205ENST00000638394 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
PRICKLE2-205ENST00000638394 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
PRICKLE2-205ENST00000638394 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
PRICKLE2-205ENST00000638394 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
PRICKLE2-205ENST00000638394 NEFMP07197 916 aa12.26□□□□□ -0.45
PRICKLE2-205ENST00000638394 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
PRICKLE2-205ENST00000638394 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
PRICKLE2-205ENST00000638394 EEA1Q15075 1411 aa12.24□□□□□ -0.45
PRICKLE2-205ENST00000638394 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
PRICKLE2-205ENST00000638394 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
PRICKLE2-205ENST00000638394 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
PRICKLE2-205ENST00000638394 BCANQ96GW7 911 aa12.17□□□□□ -0.46
PRICKLE2-205ENST00000638394 BECN1Q14457 450 aa12.16□□□□□ -0.46
PRICKLE2-205ENST00000638394 FKBP8Q14318 412 aa12.15□□□□□ -0.46
PRICKLE2-205ENST00000638394 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
PRICKLE2-205ENST00000638394 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
PRICKLE2-205ENST00000638394 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
PRICKLE2-205ENST00000638394 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
PRICKLE2-205ENST00000638394 ITGAEP38570 1179 aa12.12□□□□□ -0.47
PRICKLE2-205ENST00000638394 POLR3GLQ9BT43 218 aa12.11□□□□□ -0.47
PRICKLE2-205ENST00000638394 HSP90AA1P07900 732 aaKnown RBP12.11□□□□□ -0.47
PRICKLE2-205ENST00000638394 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
PRICKLE2-205ENST00000638394 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
PRICKLE2-205ENST00000638394 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
PRICKLE2-205ENST00000638394 NOP58Q9Y2X3 529 aaKnown RBP12.07□□□□□ -0.48
PRICKLE2-205ENST00000638394 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
PRICKLE2-205ENST00000638394 NBR1Q14596 966 aa12.07□□□□□ -0.48
PRICKLE2-205ENST00000638394 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
PRICKLE2-205ENST00000638394 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
PRICKLE2-205ENST00000638394 PTMSP20962 102 aa12.02□□□□□ -0.49
PRICKLE2-205ENST00000638394 DEKP35659 375 aaKnown RBP11.99□□□□□ -0.49
PRICKLE2-205ENST00000638394 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRICKLE2-205ENST00000638394 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
PRICKLE2-205ENST00000638394 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
PRICKLE2-205ENST00000638394 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
PRICKLE2-205ENST00000638394 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
PRICKLE2-205ENST00000638394 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PRICKLE2-205ENST00000638394 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
PRICKLE2-205ENST00000638394 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
PRICKLE2-205ENST00000638394 CHAF1AQ13111 956 aaPredicted RBP11.92□□□□□ -0.5
PRICKLE2-205ENST00000638394 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
PRICKLE2-205ENST00000638394 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
PRICKLE2-205ENST00000638394 SUPT16HQ9Y5B9 1047 aaKnown RBP11.9□□□□□ -0.5
PRICKLE2-205ENST00000638394 CHMP4BQ9H444 224 aaKnown RBP11.9□□□□□ -0.51
PRICKLE2-205ENST00000638394 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
PRICKLE2-205ENST00000638394 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
PRICKLE2-205ENST00000638394 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
PRICKLE2-205ENST00000638394 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
PRICKLE2-205ENST00000638394 CLIP1P30622 1438 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms