Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 AL596244.1-201ENST00000567068 3779 ntBASIC7.14□□□□□ -1.27
HTTP42858 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 AC103591.2-201ENST00000265259 766 ntBASIC7.14□□□□□ -1.27
HTTP42858 AC006455.6-201ENST00000426192 893 ntBASIC7.14□□□□□ -1.27
HTTP42858 RPS12P17-201ENST00000438591 377 ntBASIC7.14□□□□□ -1.27
HTTP42858 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.14□□□□□ -1.27
HTTP42858 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 RN7SL808P-201ENST00000496066 299 ntBASIC7.14□□□□□ -1.27
HTTP42858 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.14□□□□□ -1.27
HTTP42858 SNORA70D-201ENST00000578836 135 ntBASIC7.14□□□□□ -1.27
HTTP42858 AC245014.3-201ENST00000618589 347 ntBASIC7.14□□□□□ -1.27
HTTP42858 AL354718.1-201ENST00000619764 589 ntBASIC7.14□□□□□ -1.27
HTTP42858 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 AL023806.3-201ENST00000638502 2704 ntBASIC7.14□□□□□ -1.27
HTTP42858 OTOF-201ENST00000272371 7156 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 SNORA64.1-201ENST00000362600 132 ntBASIC7.14□□□□□ -1.27
HTTP42858 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.14□□□□□ -1.27
HTTP42858 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 MIR3691-201ENST00000578066 90 ntBASIC7.14□□□□□ -1.27
HTTP42858 SETP3-201ENST00000581726 813 ntBASIC7.14□□□□□ -1.27
HTTP42858 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.14□□□□□ -1.27
HTTP42858 AC139795.3-201ENST00000606358 541 ntBASIC7.14□□□□□ -1.27
HTTP42858 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.14□□□□□ -1.27
HTTP42858 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 MIR375-201ENST00000362103 64 ntBASIC7.13□□□□□ -1.27
HTTP42858 AC245060.4-201ENST00000413293 1121 ntBASIC7.13□□□□□ -1.27
HTTP42858 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
HTTP42858 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.13□□□□□ -1.27
HTTP42858 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 NEK2P2-201ENST00000438441 1338 ntBASIC7.13□□□□□ -1.27
HTTP42858 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 OR13C1P-202ENST00000641378 2919 ntBASIC7.13□□□□□ -1.27
HTTP42858 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 SDHDP6-201ENST00000414693 480 ntBASIC7.13□□□□□ -1.27
HTTP42858 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.13□□□□□ -1.27
HTTP42858 RN7SL208P-201ENST00000577964 296 ntBASIC7.13□□□□□ -1.27
HTTP42858 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.13□□□□□ -1.27
HTTP42858 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.13□□□□□ -1.27
HTTP42858 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.13□□□□□ -1.27
HTTP42858 SAMMSON-227ENST00000642114 1199 ntBASIC7.13□□□□□ -1.27
HTTP42858 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HTTP42858 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC7.13□□□□□ -1.27
HTTP42858 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HTTP42858 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 RPL35AP3-201ENST00000414680 288 ntBASIC7.12□□□□□ -1.27
HTTP42858 VN1R110P-201ENST00000438988 971 ntBASIC7.12□□□□□ -1.27
HTTP42858 RN7SL466P-201ENST00000497546 295 ntBASIC7.12□□□□□ -1.27
HTTP42858 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 IGHV4-55-201ENST00000520889 368 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms