RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
RGPD5-201ENST00000016946 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
RGPD5-201ENST00000016946 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
RGPD5-201ENST00000016946 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
RGPD5-201ENST00000016946 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
RGPD5-201ENST00000016946 APLP2Q06481 763 aa17.66■□□□□ 0.42
RGPD5-201ENST00000016946 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
RGPD5-201ENST00000016946 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
RGPD5-201ENST00000016946 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
RGPD5-201ENST00000016946 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
RGPD5-201ENST00000016946 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
RGPD5-201ENST00000016946 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
RGPD5-201ENST00000016946 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
RGPD5-201ENST00000016946 ABCC9O60706 1549 aa16.86■□□□□ 0.29
RGPD5-201ENST00000016946 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
RGPD5-201ENST00000016946 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
RGPD5-201ENST00000016946 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
RGPD5-201ENST00000016946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
RGPD5-201ENST00000016946 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
RGPD5-201ENST00000016946 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
RGPD5-201ENST00000016946 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
RGPD5-201ENST00000016946 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.24
RGPD5-201ENST00000016946 ITGAEP38570 1179 aa16.44■□□□□ 0.22
RGPD5-201ENST00000016946 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
RGPD5-201ENST00000016946 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
RGPD5-201ENST00000016946 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
RGPD5-201ENST00000016946 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
RGPD5-201ENST00000016946 FBLN2P98095 1184 aa16.26■□□□□ 0.19
RGPD5-201ENST00000016946 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
RGPD5-201ENST00000016946 NEFLP07196 543 aa16.15■□□□□ 0.18
RGPD5-201ENST00000016946 FAM50AQ14320 339 aaKnown RBP16.09■□□□□ 0.17
RGPD5-201ENST00000016946 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
RGPD5-201ENST00000016946 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.16
RGPD5-201ENST00000016946 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
RGPD5-201ENST00000016946 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
RGPD5-201ENST00000016946 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
RGPD5-201ENST00000016946 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
RGPD5-201ENST00000016946 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
RGPD5-201ENST00000016946 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
RGPD5-201ENST00000016946 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
RGPD5-201ENST00000016946 HRCP23327 699 aa15.87■□□□□ 0.13
RGPD5-201ENST00000016946 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
RGPD5-201ENST00000016946 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
RGPD5-201ENST00000016946 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
RGPD5-201ENST00000016946 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
RGPD5-201ENST00000016946 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
RGPD5-201ENST00000016946 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
RGPD5-201ENST00000016946 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
RGPD5-201ENST00000016946 BCANQ96GW7 911 aa15.7■□□□□ 0.1
RGPD5-201ENST00000016946 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
RGPD5-201ENST00000016946 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
RGPD5-201ENST00000016946 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
RGPD5-201ENST00000016946 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
RGPD5-201ENST00000016946 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
RGPD5-201ENST00000016946 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
RGPD5-201ENST00000016946 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
RGPD5-201ENST00000016946 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
RGPD5-201ENST00000016946 NACADO15069 1562 aa15.48■□□□□ 0.07
RGPD5-201ENST00000016946 ANP32CO43423 234 aa15.48■□□□□ 0.07
RGPD5-201ENST00000016946 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
RGPD5-201ENST00000016946 NEFMP07197 916 aa15.46■□□□□ 0.07
RGPD5-201ENST00000016946 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
RGPD5-201ENST00000016946 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
RGPD5-201ENST00000016946 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
RGPD5-201ENST00000016946 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
RGPD5-201ENST00000016946 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
RGPD5-201ENST00000016946 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
RGPD5-201ENST00000016946 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
RGPD5-201ENST00000016946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
RGPD5-201ENST00000016946 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
RGPD5-201ENST00000016946 KCNH8Q96L42 1107 aa15.33■□□□□ 0.05
RGPD5-201ENST00000016946 PLEKHD1A6NEE1 506 aa15.33■□□□□ 0.04
RGPD5-201ENST00000016946 TONSLQ96HA7 1378 aa15.33■□□□□ 0.04
RGPD5-201ENST00000016946 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
RGPD5-201ENST00000016946 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
RGPD5-201ENST00000016946 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
RGPD5-201ENST00000016946 CLIP1P30622 1438 aa15.28■□□□□ 0.04
RGPD5-201ENST00000016946 CANXP27824 592 aaKnown RBP15.28■□□□□ 0.04
RGPD5-201ENST00000016946 EEA1Q15075 1411 aa15.25■□□□□ 0.03
RGPD5-201ENST00000016946 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
RGPD5-201ENST00000016946 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
RGPD5-201ENST00000016946 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
RGPD5-201ENST00000016946 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
RGPD5-201ENST00000016946 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
RGPD5-201ENST00000016946 ARID4BQ4LE39 1312 aaPredicted RBP15.15■□□□□ 0.02
RGPD5-201ENST00000016946 GOLGA3Q08378 1498 aa15.15■□□□□ 0.02
RGPD5-201ENST00000016946 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
RGPD5-201ENST00000016946 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
RGPD5-201ENST00000016946 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
RGPD5-201ENST00000016946 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
RGPD5-201ENST00000016946 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
RGPD5-201ENST00000016946 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
RGPD5-201ENST00000016946 ACIN1Q9UKV3 1341 aaKnown RBP15.06■□□□□ 0
RGPD5-201ENST00000016946 CEP162Q5TB80 1403 aa15.06■□□□□ 0
RGPD5-201ENST00000016946 C14orf37Q86TY3 774 aa15.05■□□□□ 0
RGPD5-201ENST00000016946 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
RGPD5-201ENST00000016946 DDX10Q13206 875 aaKnown RBP15.04■□□□□ -0
RGPD5-201ENST00000016946 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
RGPD5-201ENST00000016946 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
RGPD5-201ENST00000016946 PDS5BQ9NTI5 1447 aa15.02□□□□□ -0.01
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