RNA–Protein interactions for RNA: ENST00000539363.2

ITGA10-204, Transcript of integrin subunit alpha 10, humanhuman

TSL 1 (best) BASIC

Gene ITGA10, Length 4,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA10-204ENST00000539363 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
ITGA10-204ENST00000539363 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
ITGA10-204ENST00000539363 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
ITGA10-204ENST00000539363 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
ITGA10-204ENST00000539363 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
ITGA10-204ENST00000539363 APLP2Q06481 763 aa15.42■□□□□ 0.06
ITGA10-204ENST00000539363 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
ITGA10-204ENST00000539363 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
ITGA10-204ENST00000539363 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
ITGA10-204ENST00000539363 TTBK1Q5TCY1 1321 aaPredicted RBP14.99□□□□□ -0.01
ITGA10-204ENST00000539363 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
ITGA10-204ENST00000539363 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.02
ITGA10-204ENST00000539363 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
ITGA10-204ENST00000539363 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
ITGA10-204ENST00000539363 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
ITGA10-204ENST00000539363 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
ITGA10-204ENST00000539363 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ITGA10-204ENST00000539363 ABCC9O60706 1549 aa14.68□□□□□ -0.06
ITGA10-204ENST00000539363 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.07
ITGA10-204ENST00000539363 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.08
ITGA10-204ENST00000539363 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
ITGA10-204ENST00000539363 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.08
ITGA10-204ENST00000539363 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.08
ITGA10-204ENST00000539363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
ITGA10-204ENST00000539363 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
ITGA10-204ENST00000539363 ITGAEP38570 1179 aa14.36□□□□□ -0.11
ITGA10-204ENST00000539363 HRCP23327 699 aa14.3□□□□□ -0.12
ITGA10-204ENST00000539363 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.12
ITGA10-204ENST00000539363 NEFLP07196 543 aa14.27□□□□□ -0.13
ITGA10-204ENST00000539363 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.14
ITGA10-204ENST00000539363 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
ITGA10-204ENST00000539363 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
ITGA10-204ENST00000539363 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
ITGA10-204ENST00000539363 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
ITGA10-204ENST00000539363 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
ITGA10-204ENST00000539363 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
ITGA10-204ENST00000539363 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
ITGA10-204ENST00000539363 FBLN2P98095 1184 aa13.99□□□□□ -0.17
ITGA10-204ENST00000539363 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
ITGA10-204ENST00000539363 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
ITGA10-204ENST00000539363 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
ITGA10-204ENST00000539363 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
ITGA10-204ENST00000539363 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
ITGA10-204ENST00000539363 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
ITGA10-204ENST00000539363 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
ITGA10-204ENST00000539363 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
ITGA10-204ENST00000539363 NACADO15069 1562 aa13.77□□□□□ -0.21
ITGA10-204ENST00000539363 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
ITGA10-204ENST00000539363 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
ITGA10-204ENST00000539363 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
ITGA10-204ENST00000539363 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.21
ITGA10-204ENST00000539363 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
ITGA10-204ENST00000539363 ANP32CO43423 234 aa13.7□□□□□ -0.22
ITGA10-204ENST00000539363 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
ITGA10-204ENST00000539363 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
ITGA10-204ENST00000539363 MYT1Q01538 1121 aa13.63□□□□□ -0.23
ITGA10-204ENST00000539363 EEA1Q15075 1411 aa13.62□□□□□ -0.23
ITGA10-204ENST00000539363 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
ITGA10-204ENST00000539363 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
ITGA10-204ENST00000539363 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
ITGA10-204ENST00000539363 CLIP1P30622 1438 aa13.55□□□□□ -0.24
ITGA10-204ENST00000539363 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
ITGA10-204ENST00000539363 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
ITGA10-204ENST00000539363 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
ITGA10-204ENST00000539363 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.24
ITGA10-204ENST00000539363 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
ITGA10-204ENST00000539363 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
ITGA10-204ENST00000539363 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
ITGA10-204ENST00000539363 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
ITGA10-204ENST00000539363 BCANQ96GW7 911 aa13.48□□□□□ -0.25
ITGA10-204ENST00000539363 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
ITGA10-204ENST00000539363 NEFMP07197 916 aa13.46□□□□□ -0.25
ITGA10-204ENST00000539363 KIF27Q86VH2 1401 aa13.46□□□□□ -0.26
ITGA10-204ENST00000539363 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
ITGA10-204ENST00000539363 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
ITGA10-204ENST00000539363 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
ITGA10-204ENST00000539363 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
ITGA10-204ENST00000539363 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
ITGA10-204ENST00000539363 TNIKQ9UKE5 1360 aa13.4□□□□□ -0.26
ITGA10-204ENST00000539363 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
ITGA10-204ENST00000539363 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
ITGA10-204ENST00000539363 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
ITGA10-204ENST00000539363 PLEKHD1A6NEE1 506 aa13.38□□□□□ -0.27
ITGA10-204ENST00000539363 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
ITGA10-204ENST00000539363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGA10-204ENST00000539363 RTL5Q5HYW3 569 aaPredicted RBP13.36□□□□□ -0.27
ITGA10-204ENST00000539363 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
ITGA10-204ENST00000539363 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
ITGA10-204ENST00000539363 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
ITGA10-204ENST00000539363 RRP7BPQ9NSQ0 103 aa13.29□□□□□ -0.28
ITGA10-204ENST00000539363 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
ITGA10-204ENST00000539363 KCNH8Q96L42 1107 aa13.27□□□□□ -0.28
ITGA10-204ENST00000539363 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
ITGA10-204ENST00000539363 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
ITGA10-204ENST00000539363 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
ITGA10-204ENST00000539363 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
ITGA10-204ENST00000539363 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
ITGA10-204ENST00000539363 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
ITGA10-204ENST00000539363 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
ITGA10-204ENST00000539363 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms