RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
CX3CR1-201ENST00000358309 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
CX3CR1-201ENST00000358309 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
CX3CR1-201ENST00000358309 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
CX3CR1-201ENST00000358309 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
CX3CR1-201ENST00000358309 ABCC9O60706 1549 aa11.04□□□□□ -0.64
CX3CR1-201ENST00000358309 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
CX3CR1-201ENST00000358309 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
CX3CR1-201ENST00000358309 FAM9AQ8IZU1 332 aaPredicted RBP10.86□□□□□ -0.67
CX3CR1-201ENST00000358309 TTBK1Q5TCY1 1321 aaPredicted RBP10.69□□□□□ -0.7
CX3CR1-201ENST00000358309 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
CX3CR1-201ENST00000358309 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
CX3CR1-201ENST00000358309 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
CX3CR1-201ENST00000358309 ZCCHC6Q5VYS8 1495 aaKnown RBP10.55□□□□□ -0.72
CX3CR1-201ENST00000358309 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
CX3CR1-201ENST00000358309 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
CX3CR1-201ENST00000358309 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
CX3CR1-201ENST00000358309 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
CX3CR1-201ENST00000358309 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
CX3CR1-201ENST00000358309 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
CX3CR1-201ENST00000358309 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.76
CX3CR1-201ENST00000358309 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
CX3CR1-201ENST00000358309 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
CX3CR1-201ENST00000358309 RSF1Q96T23 1441 aaPredicted RBP10.11□□□□□ -0.79
CX3CR1-201ENST00000358309 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
CX3CR1-201ENST00000358309 NACADO15069 1562 aa10.09□□□□□ -0.79
CX3CR1-201ENST00000358309 MROH2BQ7Z745 1585 aa10.03□□□□□ -0.8
CX3CR1-201ENST00000358309 ARID3CA6NKF2 412 aa10.02□□□□□ -0.8
CX3CR1-201ENST00000358309 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
CX3CR1-201ENST00000358309 RB1CC1Q8TDY2 1594 aa9.96□□□□□ -0.82
CX3CR1-201ENST00000358309 ITGAEP38570 1179 aa9.96□□□□□ -0.82
CX3CR1-201ENST00000358309 WIZO95785 1651 aa9.92□□□□□ -0.82
CX3CR1-201ENST00000358309 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.82
CX3CR1-201ENST00000358309 FBLN2P98095 1184 aa9.87□□□□□ -0.83
CX3CR1-201ENST00000358309 HNRNPUL2Q1KMD3 747 aaKnown RBP9.87□□□□□ -0.83
CX3CR1-201ENST00000358309 ABCC8Q09428 1581 aa9.86□□□□□ -0.83
CX3CR1-201ENST00000358309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
CX3CR1-201ENST00000358309 SOGA1O94964 1423 aa9.79□□□□□ -0.84
CX3CR1-201ENST00000358309 RUSC2Q8N2Y8 1516 aa9.78□□□□□ -0.84
CX3CR1-201ENST00000358309 CCDC88BA6NC98 1476 aa9.77□□□□□ -0.85
CX3CR1-201ENST00000358309 CSRNP3Q8WYN3 585 aa9.74□□□□□ -0.85
CX3CR1-201ENST00000358309 APLP2Q06481 763 aa9.74□□□□□ -0.85
CX3CR1-201ENST00000358309 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
CX3CR1-201ENST00000358309 BAZ1BQ9UIG0 1483 aaKnown RBP9.71□□□□□ -0.86
CX3CR1-201ENST00000358309 BICRAQ9NZM4 1560 aa9.7□□□□□ -0.86
CX3CR1-201ENST00000358309 BAZ1AQ9NRL2 1556 aaPredicted RBP9.65□□□□□ -0.87
CX3CR1-201ENST00000358309 TRIM26Q12899 539 aaPredicted RBP9.64□□□□□ -0.87
CX3CR1-201ENST00000358309 NESP48681 1621 aa9.64□□□□□ -0.87
CX3CR1-201ENST00000358309 CNGB1Q14028 1251 aaPredicted RBP9.64□□□□□ -0.87
CX3CR1-201ENST00000358309 ATAD2BQ9ULI0 1458 aa9.63□□□□□ -0.87
CX3CR1-201ENST00000358309 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
CX3CR1-201ENST00000358309 WRNQ14191 1432 aaPredicted RBP eCLIP9.59□□□□□ -0.87
CX3CR1-201ENST00000358309 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
CX3CR1-201ENST00000358309 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
CX3CR1-201ENST00000358309 SENP3Q9H4L4 574 aaPredicted RBP9.57□□□□□ -0.88
CX3CR1-201ENST00000358309 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
CX3CR1-201ENST00000358309 HRCP23327 699 aa9.55□□□□□ -0.88
CX3CR1-201ENST00000358309 EIF4G1Q04637 1599 aaKnown RBP9.52□□□□□ -0.89
CX3CR1-201ENST00000358309 YTHDC1Q96MU7 727 aaKnown RBP9.51□□□□□ -0.89
CX3CR1-201ENST00000358309 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
CX3CR1-201ENST00000358309 TOP2AP11388 1531 aaKnown RBP9.5□□□□□ -0.89
CX3CR1-201ENST00000358309 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
CX3CR1-201ENST00000358309 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
CX3CR1-201ENST00000358309 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
CX3CR1-201ENST00000358309 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
CX3CR1-201ENST00000358309 RAD54L2Q9Y4B4 1467 aa9.48□□□□□ -0.89
CX3CR1-201ENST00000358309 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
CX3CR1-201ENST00000358309 CEP162Q5TB80 1403 aa9.46□□□□□ -0.89
CX3CR1-201ENST00000358309 CUX2O14529 1486 aa9.45□□□□□ -0.9
CX3CR1-201ENST00000358309 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
CX3CR1-201ENST00000358309 CC2D2AQ9P2K1 1620 aa9.43□□□□□ -0.9
CX3CR1-201ENST00000358309 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
CX3CR1-201ENST00000358309 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
CX3CR1-201ENST00000358309 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.9
CX3CR1-201ENST00000358309 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
CX3CR1-201ENST00000358309 CLIP1P30622 1438 aa9.4□□□□□ -0.91
CX3CR1-201ENST00000358309 PLPPR3Q6T4P5 718 aa9.39□□□□□ -0.91
CX3CR1-201ENST00000358309 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
CX3CR1-201ENST00000358309 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
CX3CR1-201ENST00000358309 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
CX3CR1-201ENST00000358309 POLR3GLQ9BT43 218 aa9.38□□□□□ -0.91
CX3CR1-201ENST00000358309 AQRO60306 1485 aaKnown RBP eCLIP9.37□□□□□ -0.91
CX3CR1-201ENST00000358309 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
CX3CR1-201ENST00000358309 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
CX3CR1-201ENST00000358309 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
CX3CR1-201ENST00000358309 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
CX3CR1-201ENST00000358309 CARMIL1Q5VZK9 1371 aa9.33□□□□□ -0.92
CX3CR1-201ENST00000358309 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
CX3CR1-201ENST00000358309 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
CX3CR1-201ENST00000358309 FOXD1Q16676 465 aa9.32□□□□□ -0.92
CX3CR1-201ENST00000358309 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
CX3CR1-201ENST00000358309 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
CX3CR1-201ENST00000358309 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
CX3CR1-201ENST00000358309 SIN3AQ96ST3 1273 aa9.29□□□□□ -0.92
CX3CR1-201ENST00000358309 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
CX3CR1-201ENST00000358309 CUX1P39880 1505 aa9.28□□□□□ -0.92
CX3CR1-201ENST00000358309 IGF1RP08069 1367 aa9.28□□□□□ -0.92
CX3CR1-201ENST00000358309 GOLGA3Q08378 1498 aa9.27□□□□□ -0.93
CX3CR1-201ENST00000358309 PRDM2Q13029 1718 aa9.27□□□□□ -0.93
CX3CR1-201ENST00000358309 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms