Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 MFSD11-216ENST00000590393 1141 ntBASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VTI1BQ9UEU0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 TNXA-203ENST00000507684 2038 ntBASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 AC093484.2-201ENST00000580996 2166 ntBASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTI1BQ9UEU0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 AC010536.3-201ENST00000620306 533 ntBASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTI1BQ9UEU0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 RBM17P2-201ENST00000616397 1405 ntBASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 AC080038.1-201ENST00000611274 1154 ntBASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VTI1BQ9UEU0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 TERF1P5-201ENST00000477545 1207 ntBASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 DUX4L16-201ENST00000555130 1264 ntBASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
VTI1BQ9UEU0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms