Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GPN1Q9HCN4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPN1Q9HCN4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GPN1Q9HCN4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
GPN1Q9HCN4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 LTB4R2-202ENST00000528054 3092 ntBASIC16.91■□□□□ 0.3
GPN1Q9HCN4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 AC004987.1-201ENST00000428627 508 ntBASIC16.91■□□□□ 0.3
GPN1Q9HCN4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 AC103724.3-201ENST00000564481 992 ntBASIC16.91■□□□□ 0.3
GPN1Q9HCN4 AC092028.1-203ENST00000608262 953 ntBASIC16.91■□□□□ 0.3
GPN1Q9HCN4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPN1Q9HCN4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 YBX1P4-201ENST00000392794 808 ntBASIC16.9■□□□□ 0.3
GPN1Q9HCN4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 NTF6A-201ENST00000591175 560 ntBASIC16.9■□□□□ 0.3
GPN1Q9HCN4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GPN1Q9HCN4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPN1Q9HCN4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GPN1Q9HCN4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
GPN1Q9HCN4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPN1Q9HCN4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPN1Q9HCN4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.88■□□□□ 0.29
GPN1Q9HCN4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GPN1Q9HCN4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPN1Q9HCN4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GPN1Q9HCN4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GPN1Q9HCN4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms