Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXC2Q99958 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FOXC2Q99958 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXC2Q99958 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXC2Q99958 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXC2Q99958 C9orf163-202ENST00000624034 2573 ntBASIC16.82■□□□□ 0.28
FOXC2Q99958 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 RNF152P1-201ENST00000397754 604 ntBASIC16.82■□□□□ 0.28
FOXC2Q99958 AC117947.1-201ENST00000427448 529 ntBASIC16.82■□□□□ 0.28
FOXC2Q99958 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.82■□□□□ 0.28
FOXC2Q99958 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXC2Q99958 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXC2Q99958 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.82■□□□□ 0.28
FOXC2Q99958 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXC2Q99958 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXC2Q99958 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXC2Q99958 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FOXC2Q99958 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXC2Q99958 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXC2Q99958 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXC2Q99958 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXC2Q99958 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXC2Q99958 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXC2Q99958 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXC2Q99958 AL450487.1-201ENST00000426799 995 ntBASIC16.81■□□□□ 0.28
FOXC2Q99958 AC091390.4-202ENST00000476426 537 ntBASIC16.81■□□□□ 0.28
FOXC2Q99958 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXC2Q99958 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXC2Q99958 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXC2Q99958 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXC2Q99958 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FOXC2Q99958 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXC2Q99958 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 HMGA1P5-201ENST00000412453 271 ntBASIC16.8■□□□□ 0.28
FOXC2Q99958 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXC2Q99958 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXC2Q99958 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 FAM87A-204ENST00000613235 858 ntBASIC16.8■□□□□ 0.28
FOXC2Q99958 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.8■□□□□ 0.28
FOXC2Q99958 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXC2Q99958 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FOXC2Q99958 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXC2Q99958 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FOXC2Q99958 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
FOXC2Q99958 FAM99A-202ENST00000538190 1989 ntBASIC16.79■□□□□ 0.28
FOXC2Q99958 AL117328.2-201ENST00000624617 1940 ntBASIC16.79■□□□□ 0.28
FOXC2Q99958 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXC2Q99958 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXC2Q99958 MESTP1-201ENST00000404287 994 ntBASIC16.79■□□□□ 0.28
FOXC2Q99958 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXC2Q99958 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.79■□□□□ 0.28
FOXC2Q99958 FAM207BP-201ENST00000447172 505 ntBASIC16.79■□□□□ 0.28
FOXC2Q99958 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
FOXC2Q99958 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXC2Q99958 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXC2Q99958 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXC2Q99958 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
FOXC2Q99958 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXC2Q99958 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXC2Q99958 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXC2Q99958 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXC2Q99958 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms