Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 AC006455.2-201ENST00000429931 906 ntBASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 AL117332.1-201ENST00000622628 974 ntBASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RAB3IPQ96QF0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 AC135050.7-201ENST00000624508 2218 ntBASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 CROCCP3-202ENST00000420820 1947 ntBASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 AC018470.1-201ENST00000624790 3129 ntBASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB3IPQ96QF0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3IPQ96QF0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 BX119927.1-201ENST00000636596 1552 ntBASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB3IPQ96QF0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3IPQ96QF0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RAB3IPQ96QF0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3IPQ96QF0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms