Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 PLK5-205ENST00000642079 1969 ntBASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MS4A3Q96HJ5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 AC121338.2-201ENST00000622535 1744 ntBASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 FGA-203ENST00000622532 1130 ntTSL 5 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MS4A3Q96HJ5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AL390039.1-201ENST00000399148 611 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC093787.1-201ENST00000450396 207 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 RARRES2P4-201ENST00000514074 484 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AL162412.1-201ENST00000567129 965 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC069236.1-201ENST00000604339 616 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC008694.1-202ENST00000636953 945 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC011484.1-201ENST00000377652 1995 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC112907.3-201ENST00000577781 2400 ntBASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A3Q96HJ5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 NCF1B-203ENST00000435988 1254 ntBASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 AC083906.2-201ENST00000511578 360 ntBASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 AC105036.2-201ENST00000569468 176 ntBASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 RPAP2P1-201ENST00000603626 1168 ntBASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MS4A3Q96HJ5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms