RNA–Protein interactions for RNA: ENST00000456424.2

FO393415.3-201, humanhuman

TSL 3 BASIC

Gene FO393415.3, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FO393415.3-201ENST00000456424 AEBP2Q6ZN18 517 aaPredicted RBP36.65■■■■□ 3.46
FO393415.3-201ENST00000456424 CHIC1Q5VXU3 224 aa34.63■■■■□ 3.13
FO393415.3-201ENST00000456424 SENP3Q9H4L4 574 aaPredicted RBP31.29■■■□□ 2.6
FO393415.3-201ENST00000456424 PHF23Q9BUL5 403 aaPredicted RBP30.85■■■□□ 2.53
FO393415.3-201ENST00000456424 FOXD1Q16676 465 aa29.18■■■□□ 2.26
FO393415.3-201ENST00000456424 PLPPR3Q6T4P5 718 aa27.57■■■□□ 2
FO393415.3-201ENST00000456424 MSH5O43196 834 aa27.39■■□□□ 1.98
FO393415.3-201ENST00000456424 PIAS4Q8N2W9 510 aaPredicted RBP27.21■■□□□ 1.95
FO393415.3-201ENST00000456424 PPP6R1Q9UPN7 881 aa27.14■■□□□ 1.94
FO393415.3-201ENST00000456424 POTEDQ86YR6 584 aa27.05■■□□□ 1.92
FO393415.3-201ENST00000456424 ADRA2BP18089 450 aa27.02■■□□□ 1.92
FO393415.3-201ENST00000456424 MAPK8IP2Q13387 824 aaPredicted RBP24.88■■□□□ 1.57
FO393415.3-201ENST00000456424 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
FO393415.3-201ENST00000456424 SCAF1Q9H7N4 1312 aaKnown RBP24.74■■□□□ 1.55
FO393415.3-201ENST00000456424 PPP4R3CPQ6ZMV5 832 aa24.13■■□□□ 1.45
FO393415.3-201ENST00000456424 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
FO393415.3-201ENST00000456424 CNKSR2Q8WXI2 1034 aa23.74■■□□□ 1.39
FO393415.3-201ENST00000456424 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
FO393415.3-201ENST00000456424 CACNB1Q02641 598 aaPredicted RBP23.59■■□□□ 1.37
FO393415.3-201ENST00000456424 RNF216Q9NWF9 866 aaPredicted RBP23.58■■□□□ 1.37
FO393415.3-201ENST00000456424 RNF39Q9H2S5 420 aa23.37■■□□□ 1.33
FO393415.3-201ENST00000456424 NCBP3Q53F19 620 aaKnown RBP23.14■■□□□ 1.29
FO393415.3-201ENST00000456424 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
FO393415.3-201ENST00000456424 C1QBPQ07021 282 aaKnown RBP23.01■■□□□ 1.27
FO393415.3-201ENST00000456424 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
FO393415.3-201ENST00000456424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.21
FO393415.3-201ENST00000456424 KCNA4P22459 653 aa22.21■■□□□ 1.15
FO393415.3-201ENST00000456424 U3KPZ7 1027 aaPredicted RBP22.17■■□□□ 1.14
FO393415.3-201ENST00000456424 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
FO393415.3-201ENST00000456424 CAPN15O75808 1086 aa21.85■■□□□ 1.09
FO393415.3-201ENST00000456424 SLC4A2P04920 1241 aa21.85■■□□□ 1.09
FO393415.3-201ENST00000456424 DSG3P32926 999 aa21.81■■□□□ 1.08
FO393415.3-201ENST00000456424 APLP2Q06481 763 aa21.53■■□□□ 1.04
FO393415.3-201ENST00000456424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
FO393415.3-201ENST00000456424 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
FO393415.3-201ENST00000456424 TRHP20396 242 aaPredicted RBP21.45■■□□□ 1.02
FO393415.3-201ENST00000456424 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
FO393415.3-201ENST00000456424 SAMD1Q6SPF0 538 aaPredicted RBP21.35■■□□□ 1.01
FO393415.3-201ENST00000456424 ABCB7O75027 752 aa21.32■■□□□ 1
FO393415.3-201ENST00000456424 POTEHQ6S545 545 aa21.16■□□□□ 0.98
FO393415.3-201ENST00000456424 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
FO393415.3-201ENST00000456424 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
FO393415.3-201ENST00000456424 POLA2Q14181 598 aa20.85■□□□□ 0.93
FO393415.3-201ENST00000456424 RBM42Q9BTD8 480 aaKnown RBP20.81■□□□□ 0.92
FO393415.3-201ENST00000456424 FOXD4L1Q9NU39 408 aa20.79■□□□□ 0.92
FO393415.3-201ENST00000456424 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
FO393415.3-201ENST00000456424 ZBTB22O15209 634 aa20.43■□□□□ 0.86
FO393415.3-201ENST00000456424 CHRDL2Q6WN34 429 aa20.43■□□□□ 0.86
FO393415.3-201ENST00000456424 ZBTB12Q9Y330 459 aaPredicted RBP20.43■□□□□ 0.86
FO393415.3-201ENST00000456424 AKT1S1Q96B36 256 aa20.3■□□□□ 0.84
FO393415.3-201ENST00000456424 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
FO393415.3-201ENST00000456424 ATXN8OSP0DMR3 200 aa20.19■□□□□ 0.82
FO393415.3-201ENST00000456424 REM2Q8IYK8 340 aaPredicted RBP20.1■□□□□ 0.81
FO393415.3-201ENST00000456424 PIP4P2Q8N4L2 257 aa19.9■□□□□ 0.78
FO393415.3-201ENST00000456424 PITPNM1O00562 1244 aa19.88■□□□□ 0.77
FO393415.3-201ENST00000456424 FBLN2P98095 1184 aa19.83■□□□□ 0.77
FO393415.3-201ENST00000456424 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
FO393415.3-201ENST00000456424 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
FO393415.3-201ENST00000456424 SPDYE2Q495Y8 402 aa19.79■□□□□ 0.76
FO393415.3-201ENST00000456424 FXR2P51116 673 aaKnown RBP eCLIP19.76■□□□□ 0.75
FO393415.3-201ENST00000456424 SP7Q8TDD2 431 aaPredicted RBP19.75■□□□□ 0.75
FO393415.3-201ENST00000456424 MKRN4PQ13434 485 aaPredicted RBP19.68■□□□□ 0.74
FO393415.3-201ENST00000456424 HAX1O00165 279 aa19.56■□□□□ 0.72
FO393415.3-201ENST00000456424 SSUH2Q9Y2M2 353 aa19.52■□□□□ 0.72
FO393415.3-201ENST00000456424 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
FO393415.3-201ENST00000456424 SPDYE1Q8NFV5 336 aaPredicted RBP19.48■□□□□ 0.71
FO393415.3-201ENST00000456424 CLEC11AQ9Y240 323 aa19.42■□□□□ 0.7
FO393415.3-201ENST00000456424 PRKAR2AP13861 404 aaKnown RBP19.35■□□□□ 0.69
FO393415.3-201ENST00000456424 EVX2Q03828 476 aa19.33■□□□□ 0.68
FO393415.3-201ENST00000456424 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
FO393415.3-201ENST00000456424 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
FO393415.3-201ENST00000456424 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
FO393415.3-201ENST00000456424 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
FO393415.3-201ENST00000456424 CHADLQ6NUI6 762 aa19.08■□□□□ 0.64
FO393415.3-201ENST00000456424 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
FO393415.3-201ENST00000456424 GABBR2O75899 941 aa18.88■□□□□ 0.61
FO393415.3-201ENST00000456424 FARP1Q9Y4F1 1045 aaPredicted RBP18.81■□□□□ 0.6
FO393415.3-201ENST00000456424 CD44P16070 742 aaKnown RBP18.73■□□□□ 0.59
FO393415.3-201ENST00000456424 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
FO393415.3-201ENST00000456424 SPDYE4A6NLX3 237 aa18.64■□□□□ 0.57
FO393415.3-201ENST00000456424 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
FO393415.3-201ENST00000456424 CLCN6P51797 869 aa18.56■□□□□ 0.56
FO393415.3-201ENST00000456424 LHX8Q68G74 356 aa18.51■□□□□ 0.55
FO393415.3-201ENST00000456424 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
FO393415.3-201ENST00000456424 ZNF579Q8NAF0 562 aaKnown RBP18.46■□□□□ 0.55
FO393415.3-201ENST00000456424 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
FO393415.3-201ENST00000456424 DCBLD2Q96PD2 775 aa18.32■□□□□ 0.52
FO393415.3-201ENST00000456424 MNX1P50219 401 aaPredicted RBP18.27■□□□□ 0.52
FO393415.3-201ENST00000456424 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
FO393415.3-201ENST00000456424 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
FO393415.3-201ENST00000456424 GALR2O43603 387 aaPredicted RBP18.23■□□□□ 0.51
FO393415.3-201ENST00000456424 PROM2Q8N271 834 aa18.22■□□□□ 0.51
FO393415.3-201ENST00000456424 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
FO393415.3-201ENST00000456424 MS4A3Q96HJ5 214 aa17.92■□□□□ 0.46
FO393415.3-201ENST00000456424 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
FO393415.3-201ENST00000456424 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
FO393415.3-201ENST00000456424 TSPYL2Q9H2G4 693 aaPredicted RBP17.88■□□□□ 0.45
FO393415.3-201ENST00000456424 ASTLQ6HA08 431 aaPredicted RBP17.86■□□□□ 0.45
FO393415.3-201ENST00000456424 OTUD5Q96G74 571 aa17.85■□□□□ 0.45
FO393415.3-201ENST00000456424 CCDC61Q9Y6R9 512 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms