RNA–Protein interactions for RNA: ENST00000587619.1

AP001542.3-201, humanhuman

TSL 5 BASIC

Gene AP001542.3, Length 527 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001542.3-201ENST00000587619 AEBP2Q6ZN18 517 aaPredicted RBP36.41■■■■□ 3.42
AP001542.3-201ENST00000587619 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
AP001542.3-201ENST00000587619 SENP3Q9H4L4 574 aaPredicted RBP30.82■■■□□ 2.52
AP001542.3-201ENST00000587619 PHF23Q9BUL5 403 aaPredicted RBP30.52■■■□□ 2.48
AP001542.3-201ENST00000587619 FOXD1Q16676 465 aa28.83■■■□□ 2.21
AP001542.3-201ENST00000587619 PLPPR3Q6T4P5 718 aa27.71■■■□□ 2.03
AP001542.3-201ENST00000587619 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
AP001542.3-201ENST00000587619 ADRA2BP18089 450 aa27.03■■□□□ 1.92
AP001542.3-201ENST00000587619 PIAS4Q8N2W9 510 aaPredicted RBP26.87■■□□□ 1.89
AP001542.3-201ENST00000587619 MSH5O43196 834 aa26.74■■□□□ 1.87
AP001542.3-201ENST00000587619 POTEDQ86YR6 584 aa25.85■■□□□ 1.73
AP001542.3-201ENST00000587619 MAPK8IP2Q13387 824 aaPredicted RBP24.79■■□□□ 1.56
AP001542.3-201ENST00000587619 DMRT2Q9Y5R5 561 aa24.55■■□□□ 1.52
AP001542.3-201ENST00000587619 SCAF1Q9H7N4 1312 aaKnown RBP24.53■■□□□ 1.52
AP001542.3-201ENST00000587619 PPP4R3CPQ6ZMV5 832 aa24.37■■□□□ 1.49
AP001542.3-201ENST00000587619 CNKSR2Q8WXI2 1034 aa23.82■■□□□ 1.4
AP001542.3-201ENST00000587619 HOXD11P31277 338 aaPredicted RBP23.76■■□□□ 1.39
AP001542.3-201ENST00000587619 RNF216Q9NWF9 866 aaPredicted RBP23.58■■□□□ 1.37
AP001542.3-201ENST00000587619 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
AP001542.3-201ENST00000587619 DCAF8L1A6NGE4 600 aa23.34■■□□□ 1.33
AP001542.3-201ENST00000587619 NPM3O75607 178 aaKnown RBP23.21■■□□□ 1.31
AP001542.3-201ENST00000587619 KCNA4P22459 653 aa22.96■■□□□ 1.27
AP001542.3-201ENST00000587619 RNF39Q9H2S5 420 aa22.95■■□□□ 1.26
AP001542.3-201ENST00000587619 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
AP001542.3-201ENST00000587619 CACNB1Q02641 598 aaPredicted RBP22.78■■□□□ 1.24
AP001542.3-201ENST00000587619 C1QBPQ07021 282 aaKnown RBP22.54■■□□□ 1.2
AP001542.3-201ENST00000587619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
AP001542.3-201ENST00000587619 U3KPZ7 1027 aaPredicted RBP22.19■■□□□ 1.14
AP001542.3-201ENST00000587619 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
AP001542.3-201ENST00000587619 SPINK5Q9NQ38 1064 aaPredicted RBP21.8■■□□□ 1.08
AP001542.3-201ENST00000587619 SLC4A1APQ9BWU0 796 aaKnown RBP21.62■■□□□ 1.05
AP001542.3-201ENST00000587619 CAPN15O75808 1086 aa21.59■■□□□ 1.05
AP001542.3-201ENST00000587619 DSG3P32926 999 aa21.57■■□□□ 1.04
AP001542.3-201ENST00000587619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
AP001542.3-201ENST00000587619 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
AP001542.3-201ENST00000587619 MYCNP04198 464 aaPredicted RBP21.37■■□□□ 1.01
AP001542.3-201ENST00000587619 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
AP001542.3-201ENST00000587619 APLP2Q06481 763 aa21.33■■□□□ 1.01
AP001542.3-201ENST00000587619 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
AP001542.3-201ENST00000587619 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
AP001542.3-201ENST00000587619 ZNF219Q9P2Y4 722 aaPredicted RBP21.28■■□□□ 1
AP001542.3-201ENST00000587619 ZBTB22O15209 634 aa21.22■□□□□ 0.99
AP001542.3-201ENST00000587619 ABCB7O75027 752 aa21.19■□□□□ 0.98
AP001542.3-201ENST00000587619 ATF5Q9Y2D1 282 aaPredicted RBP21.02■□□□□ 0.96
AP001542.3-201ENST00000587619 POLA2Q14181 598 aa20.85■□□□□ 0.93
AP001542.3-201ENST00000587619 ATXN8OSP0DMR3 200 aa20.6■□□□□ 0.89
AP001542.3-201ENST00000587619 RBM42Q9BTD8 480 aaKnown RBP20.41■□□□□ 0.86
AP001542.3-201ENST00000587619 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
AP001542.3-201ENST00000587619 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
AP001542.3-201ENST00000587619 POTEHQ6S545 545 aa20.25■□□□□ 0.83
AP001542.3-201ENST00000587619 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
AP001542.3-201ENST00000587619 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
AP001542.3-201ENST00000587619 MKRN4PQ13434 485 aaPredicted RBP20.07■□□□□ 0.8
AP001542.3-201ENST00000587619 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
AP001542.3-201ENST00000587619 CHRDL2Q6WN34 429 aa19.96■□□□□ 0.79
AP001542.3-201ENST00000587619 FBLN2P98095 1184 aa19.92■□□□□ 0.78
AP001542.3-201ENST00000587619 REM2Q8IYK8 340 aaPredicted RBP19.91■□□□□ 0.78
AP001542.3-201ENST00000587619 SPDYE2BA6NHP3 402 aa19.81■□□□□ 0.76
AP001542.3-201ENST00000587619 SPDYE6P0CI01 402 aa19.81■□□□□ 0.76
AP001542.3-201ENST00000587619 SPDYE2Q495Y8 402 aa19.81■□□□□ 0.76
AP001542.3-201ENST00000587619 PITPNM1O00562 1244 aa19.72■□□□□ 0.75
AP001542.3-201ENST00000587619 SSUH2Q9Y2M2 353 aa19.67■□□□□ 0.74
AP001542.3-201ENST00000587619 PIP4P2Q8N4L2 257 aa19.58■□□□□ 0.72
AP001542.3-201ENST00000587619 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
AP001542.3-201ENST00000587619 FXR2P51116 673 aaKnown RBP eCLIP19.52■□□□□ 0.72
AP001542.3-201ENST00000587619 SPDYE1Q8NFV5 336 aaPredicted RBP19.37■□□□□ 0.69
AP001542.3-201ENST00000587619 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
AP001542.3-201ENST00000587619 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
AP001542.3-201ENST00000587619 PRKAR2AP13861 404 aaKnown RBP19.15■□□□□ 0.66
AP001542.3-201ENST00000587619 SP7Q8TDD2 431 aaPredicted RBP19.08■□□□□ 0.64
AP001542.3-201ENST00000587619 SPDYE4A6NLX3 237 aa19.07■□□□□ 0.64
AP001542.3-201ENST00000587619 HAX1O00165 279 aa19.05■□□□□ 0.64
AP001542.3-201ENST00000587619 EVX2Q03828 476 aa19.04■□□□□ 0.64
AP001542.3-201ENST00000587619 PRR29P0C7W0 189 aa19.02■□□□□ 0.64
AP001542.3-201ENST00000587619 CHADLQ6NUI6 762 aa19.02■□□□□ 0.64
AP001542.3-201ENST00000587619 C19orf67A6NJJ6 358 aa18.88■□□□□ 0.61
AP001542.3-201ENST00000587619 PROM2Q8N271 834 aa18.81■□□□□ 0.6
AP001542.3-201ENST00000587619 CREBZFQ9NS37 354 aa18.75■□□□□ 0.59
AP001542.3-201ENST00000587619 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
AP001542.3-201ENST00000587619 FARP1Q9Y4F1 1045 aaPredicted RBP18.74■□□□□ 0.59
AP001542.3-201ENST00000587619 CD44P16070 742 aaKnown RBP18.55■□□□□ 0.56
AP001542.3-201ENST00000587619 MNX1P50219 401 aaPredicted RBP18.53■□□□□ 0.56
AP001542.3-201ENST00000587619 GABBR2O75899 941 aa18.51■□□□□ 0.55
AP001542.3-201ENST00000587619 FKBP8Q14318 412 aa18.34■□□□□ 0.53
AP001542.3-201ENST00000587619 ZNF579Q8NAF0 562 aaKnown RBP18.33■□□□□ 0.52
AP001542.3-201ENST00000587619 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
AP001542.3-201ENST00000587619 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
AP001542.3-201ENST00000587619 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
AP001542.3-201ENST00000587619 CLCN6P51797 869 aa18.18■□□□□ 0.5
AP001542.3-201ENST00000587619 PHF12Q96QT6 1004 aa18.14■□□□□ 0.49
AP001542.3-201ENST00000587619 GALR2O43603 387 aaPredicted RBP18.11■□□□□ 0.49
AP001542.3-201ENST00000587619 MIER1Q8N108 512 aa18.09■□□□□ 0.49
AP001542.3-201ENST00000587619 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
AP001542.3-201ENST00000587619 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
AP001542.3-201ENST00000587619 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
AP001542.3-201ENST00000587619 TSPYL2Q9H2G4 693 aaPredicted RBP17.97■□□□□ 0.47
AP001542.3-201ENST00000587619 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
AP001542.3-201ENST00000587619 DCBLD2Q96PD2 775 aa17.93■□□□□ 0.46
AP001542.3-201ENST00000587619 PLEKHG5O94827 1062 aa17.92■□□□□ 0.46
AP001542.3-201ENST00000587619 MS4A3Q96HJ5 214 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms