Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 AC099791.1-201ENST00000416440 715 ntBASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 AL032819.2-201ENST00000624543 2162 ntBASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP6Q96FZ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CHMP6Q96FZ7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP6Q96FZ7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP6Q96FZ7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CHMP6Q96FZ7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CHMP6Q96FZ7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 AC106739.1-201ENST00000617035 715 ntBASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP6Q96FZ7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 DPP3P2-201ENST00000416030 1696 ntBASIC20■□□□□ 0.79
CHMP6Q96FZ7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 AC061975.6-201ENST00000579045 1553 ntBASIC20■□□□□ 0.79
CHMP6Q96FZ7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 AC027682.1-201ENST00000562846 899 ntBASIC20■□□□□ 0.79
CHMP6Q96FZ7 AC110285.6-201ENST00000617652 491 ntBASIC20■□□□□ 0.79
CHMP6Q96FZ7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP6Q96FZ7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20■□□□□ 0.79
CHMP6Q96FZ7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP6Q96FZ7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms