Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 AC099778.1-201ENST00000568593 1911 ntBASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 KRT19P1-201ENST00000405746 1186 ntBASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIML2Q8N7C3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 RBM17P2-201ENST00000616397 1405 ntBASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 FAM21FP-204ENST00000608637 956 ntBASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIML2Q8N7C3 AC004854.2-201ENST00000608450 1441 ntBASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 AC091799.1-201ENST00000422823 811 ntBASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 CDV3P1-201ENST00000471403 739 ntBASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIML2Q8N7C3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIML2Q8N7C3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms