Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 AC010141.3-201ENST00000456659 717 ntBASIC19.97■□□□□ 0.79
PACS2Q86VP3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.96■□□□□ 0.79
PACS2Q86VP3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.96■□□□□ 0.79
PACS2Q86VP3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.96■□□□□ 0.79
PACS2Q86VP3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 AL358852.1-201ENST00000623174 1268 ntBASIC19.96■□□□□ 0.79
PACS2Q86VP3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PACS2Q86VP3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PACS2Q86VP3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.95■□□□□ 0.78
PACS2Q86VP3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PACS2Q86VP3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 AL354811.1-201ENST00000610286 706 ntBASIC19.94■□□□□ 0.78
PACS2Q86VP3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.94■□□□□ 0.78
PACS2Q86VP3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PACS2Q86VP3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PACS2Q86VP3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.93■□□□□ 0.78
PACS2Q86VP3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PACS2Q86VP3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms