Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 MIR3181-201ENST00000578512 73 ntBASIC16.55■□□□□ 0.24
ZNF546Q86UE3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF546Q86UE3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF546Q86UE3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AC104581.1-202ENST00000635932 2618 ntBASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AL032819.2-201ENST00000624543 2162 ntBASIC16.53■□□□□ 0.24
ZNF546Q86UE3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF546Q86UE3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 AC055733.4-201ENST00000638462 1354 ntBASIC16.52■□□□□ 0.24
ZNF546Q86UE3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 AC009299.2-201ENST00000482477 511 ntBASIC16.52■□□□□ 0.24
ZNF546Q86UE3 UNC93B8-201ENST00000511903 705 ntBASIC16.52■□□□□ 0.24
ZNF546Q86UE3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF546Q86UE3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 AL133373.2-201ENST00000623187 2828 ntBASIC16.52■□□□□ 0.23
ZNF546Q86UE3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms