Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 AC026271.2-201ENST00000428091 497 ntBASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 BX119927.1-201ENST00000636596 1552 ntBASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
YTHDF3Q7Z739 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 SRD5A1P1-201ENST00000442297 786 ntBASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 SUDS3P1-201ENST00000505831 966 ntBASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
YTHDF3Q7Z739 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 AC120498.9-201ENST00000339021 3867 ntBASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 AL031432.3-201ENST00000607698 485 ntBASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YTHDF3Q7Z739 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
YTHDF3Q7Z739 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 EDA-201ENST00000338901 1233 ntBASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 AL355001.2-201ENST00000620617 1191 ntBASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 PRORSD1P-202ENST00000563365 2154 ntBASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YTHDF3Q7Z739 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms