Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TMC4Q7Z404 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMC4Q7Z404 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMC4Q7Z404 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 YBX1P10-201ENST00000444752 975 ntBASIC24.44■■□□□ 1.5
TMC4Q7Z404 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
TMC4Q7Z404 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 MESTP1-201ENST00000404287 994 ntBASIC24.43■■□□□ 1.5
TMC4Q7Z404 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC4Q7Z404 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TMC4Q7Z404 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TMC4Q7Z404 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
TMC4Q7Z404 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC4Q7Z404 TFP1-202ENST00000475455 1573 ntBASIC24.42■■□□□ 1.5
TMC4Q7Z404 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC4Q7Z404 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC4Q7Z404 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 KRT18P16-201ENST00000510337 1294 ntBASIC24.41■■□□□ 1.5
TMC4Q7Z404 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC4Q7Z404 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC4Q7Z404 C2orf69P3-201ENST00000565542 1120 ntBASIC24.41■■□□□ 1.5
TMC4Q7Z404 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 KRT16P6-202ENST00000425692 1426 ntBASIC24.41■■□□□ 1.5
TMC4Q7Z404 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC4Q7Z404 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.41■■□□□ 1.5
TMC4Q7Z404 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 KRT18P57-201ENST00000443599 1254 ntBASIC24.4■■□□□ 1.5
TMC4Q7Z404 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC4Q7Z404 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TMC4Q7Z404 PLK5-205ENST00000642079 1969 ntBASIC24.4■■□□□ 1.5
TMC4Q7Z404 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMC4Q7Z404 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC4Q7Z404 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC4Q7Z404 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC4Q7Z404 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.39■■□□□ 1.49
TMC4Q7Z404 B3GAT3P1-201ENST00000471720 806 ntBASIC24.39■■□□□ 1.49
TMC4Q7Z404 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.39■■□□□ 1.49
TMC4Q7Z404 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC4Q7Z404 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
TMC4Q7Z404 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.39■■□□□ 1.49
TMC4Q7Z404 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.39■■□□□ 1.49
TMC4Q7Z404 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC4Q7Z404 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC4Q7Z404 AC005229.4-201ENST00000610085 2198 ntBASIC24.39■■□□□ 1.49
TMC4Q7Z404 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
TMC4Q7Z404 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.38■■□□□ 1.49
TMC4Q7Z404 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.38■■□□□ 1.49
TMC4Q7Z404 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.38■■□□□ 1.49
TMC4Q7Z404 EGLN1P1-201ENST00000531623 762 ntBASIC24.38■■□□□ 1.49
TMC4Q7Z404 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.38■■□□□ 1.49
TMC4Q7Z404 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.38■■□□□ 1.49
TMC4Q7Z404 FEM1AP4-201ENST00000443167 1987 ntBASIC24.38■■□□□ 1.49
TMC4Q7Z404 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMC4Q7Z404 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms