Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
C4orf46Q504U0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.9■□□□□ 0.3
C4orf46Q504U0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C4orf46Q504U0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf46Q504U0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C4orf46Q504U0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
C4orf46Q504U0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 AL033527.3-201ENST00000566366 1196 ntBASIC16.88■□□□□ 0.29
C4orf46Q504U0 SMUG1P1-201ENST00000590640 811 ntBASIC16.88■□□□□ 0.29
C4orf46Q504U0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C4orf46Q504U0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C4orf46Q504U0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 AP004607.4-201ENST00000530158 1459 ntBASIC16.87■□□□□ 0.29
C4orf46Q504U0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.87■□□□□ 0.29
C4orf46Q504U0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C4orf46Q504U0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.87■□□□□ 0.29
C4orf46Q504U0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 AC012354.3-201ENST00000623734 483 ntBASIC16.86■□□□□ 0.29
C4orf46Q504U0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C4orf46Q504U0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.86■□□□□ 0.29
C4orf46Q504U0 AC009237.3-201ENST00000393279 1427 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms