Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL845331.1-201ENST00000424978 1190 ntBASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 KRT8P10-201ENST00000450021 1447 ntBASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO4Q2I0M5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO4Q2I0M5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.39■□□□□ 0.7
RSPO4Q2I0M5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO4Q2I0M5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO4Q2I0M5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 VENTXP5-201ENST00000523979 775 ntBASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 AL031432.5-201ENST00000641059 760 ntBASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO4Q2I0M5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 AC004870.1-201ENST00000315132 882 ntBASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RSPO4Q2I0M5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 KRT8P45-201ENST00000414328 1447 ntBASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 CCR12P-201ENST00000446203 998 ntBASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 AL445675.2-201ENST00000620291 557 ntBASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 AC010542.4-201ENST00000563151 1910 ntBASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 AC026471.6-201ENST00000622954 1905 ntBASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO4Q2I0M5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO4Q2I0M5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RSPO4Q2I0M5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO4Q2I0M5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms