Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.12■□□□□ 0.33
AP3S2P59780 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.11■□□□□ 0.33
AP3S2P59780 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.11■□□□□ 0.33
AP3S2P59780 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.11■□□□□ 0.33
AP3S2P59780 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP3S2P59780 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S2P59780 DPP3P2-201ENST00000416030 1696 ntBASIC17.1■□□□□ 0.33
AP3S2P59780 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AP3S2P59780 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP3S2P59780 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AP3S2P59780 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S2P59780 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.1■□□□□ 0.33
AP3S2P59780 SLC47A1P1-202ENST00000449666 945 ntBASIC17.1■□□□□ 0.33
AP3S2P59780 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AP3S2P59780 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S2P59780 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP3S2P59780 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP3S2P59780 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP3S2P59780 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
AP3S2P59780 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP3S2P59780 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
AP3S2P59780 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP3S2P59780 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.09■□□□□ 0.33
AP3S2P59780 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.09■□□□□ 0.33
AP3S2P59780 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3S2P59780 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP3S2P59780 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S2P59780 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S2P59780 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
AP3S2P59780 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S2P59780 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S2P59780 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S2P59780 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S2P59780 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S2P59780 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S2P59780 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S2P59780 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.08■□□□□ 0.32
AP3S2P59780 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S2P59780 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP3S2P59780 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S2P59780 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S2P59780 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP3S2P59780 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AP3S2P59780 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S2P59780 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3S2P59780 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.07■□□□□ 0.32
AP3S2P59780 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3S2P59780 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 AL032819.2-201ENST00000624543 2162 ntBASIC17.07■□□□□ 0.32
AP3S2P59780 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S2P59780 AC239859.2-201ENST00000444165 318 ntBASIC17.07■□□□□ 0.32
AP3S2P59780 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms