Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM11AP58511 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.35■□□□□ 0.53
SMIM11AP58511 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SMIM11AP58511 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SMIM11AP58511 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.35■□□□□ 0.53
SMIM11AP58511 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.35■□□□□ 0.53
SMIM11AP58511 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SMIM11AP58511 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.35■□□□□ 0.53
SMIM11AP58511 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SMIM11AP58511 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SMIM11AP58511 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM11AP58511 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
SMIM11AP58511 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.35■□□□□ 0.53
SMIM11AP58511 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMIM11AP58511 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SMIM11AP58511 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.34■□□□□ 0.53
SMIM11AP58511 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 KRT16P6-202ENST00000425692 1426 ntBASIC18.34■□□□□ 0.53
SMIM11AP58511 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.34■□□□□ 0.53
SMIM11AP58511 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SMIM11AP58511 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMIM11AP58511 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMIM11AP58511 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMIM11AP58511 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMIM11AP58511 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.33■□□□□ 0.53
SMIM11AP58511 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMIM11AP58511 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM11AP58511 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM11AP58511 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.33■□□□□ 0.52
SMIM11AP58511 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SMIM11AP58511 AL162412.1-201ENST00000567129 965 ntBASIC18.33■□□□□ 0.52
SMIM11AP58511 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.33■□□□□ 0.52
SMIM11AP58511 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.33■□□□□ 0.52
SMIM11AP58511 MYCNOS-205ENST00000641950 531 ntBASIC18.33■□□□□ 0.52
SMIM11AP58511 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM11AP58511 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SMIM11AP58511 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM11AP58511 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMIM11AP58511 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AC093484.2-201ENST00000580996 2166 ntBASIC18.32■□□□□ 0.52
SMIM11AP58511 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SMIM11AP58511 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SMIM11AP58511 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM11AP58511 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM11AP58511 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMIM11AP58511 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.32■□□□□ 0.52
SMIM11AP58511 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.32■□□□□ 0.52
SMIM11AP58511 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMIM11AP58511 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMIM11AP58511 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
SMIM11AP58511 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms