Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.03■□□□□ 0.8
MDH1P40925 AL138724.1-201ENST00000606771 1088 ntBASIC20.03■□□□□ 0.8
MDH1P40925 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.03■□□□□ 0.8
MDH1P40925 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.03■□□□□ 0.8
MDH1P40925 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
MDH1P40925 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MDH1P40925 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.03■□□□□ 0.8
MDH1P40925 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MDH1P40925 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MDH1P40925 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MDH1P40925 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 AC239859.2-201ENST00000444165 318 ntBASIC20.02■□□□□ 0.8
MDH1P40925 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.02■□□□□ 0.8
MDH1P40925 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
MDH1P40925 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MDH1P40925 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MDH1P40925 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.02■□□□□ 0.79
MDH1P40925 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.02■□□□□ 0.79
MDH1P40925 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
MDH1P40925 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.01■□□□□ 0.79
MDH1P40925 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.01■□□□□ 0.79
MDH1P40925 AC009237.14-201ENST00000609975 1594 ntBASIC20.01■□□□□ 0.79
MDH1P40925 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
MDH1P40925 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 AC136469.2-201ENST00000623944 1028 ntBASIC20.01■□□□□ 0.79
MDH1P40925 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.01■□□□□ 0.79
MDH1P40925 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.01■□□□□ 0.79
MDH1P40925 KRT8P36-201ENST00000489121 1440 ntBASIC20.01■□□□□ 0.79
MDH1P40925 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.01■□□□□ 0.79
MDH1P40925 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MDH1P40925 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
MDH1P40925 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20■□□□□ 0.79
MDH1P40925 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 SRD5A1P1-201ENST00000442297 786 ntBASIC20■□□□□ 0.79
MDH1P40925 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20■□□□□ 0.79
MDH1P40925 AC133561.4-201ENST00000566112 224 ntBASIC20■□□□□ 0.79
MDH1P40925 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MDH1P40925 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20■□□□□ 0.79
MDH1P40925 AP000997.3-201ENST00000623333 2250 ntBASIC20■□□□□ 0.79
MDH1P40925 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MDH1P40925 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
MDH1P40925 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.99■□□□□ 0.79
MDH1P40925 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.99■□□□□ 0.79
MDH1P40925 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
MDH1P40925 SERBP1P1-201ENST00000396021 1160 ntBASIC19.99■□□□□ 0.79
MDH1P40925 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.99■□□□□ 0.79
MDH1P40925 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MDH1P40925 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.99■□□□□ 0.79
MDH1P40925 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.99■□□□□ 0.79
MDH1P40925 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.99■□□□□ 0.79
MDH1P40925 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MDH1P40925 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.99■□□□□ 0.79
MDH1P40925 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
MDH1P40925 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms