Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
USP8P40818 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.65■■□□□ 1.06
USP8P40818 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.65■■□□□ 1.06
USP8P40818 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.65■■□□□ 1.06
USP8P40818 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.65■■□□□ 1.06
USP8P40818 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.65■■□□□ 1.06
USP8P40818 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.65■■□□□ 1.06
USP8P40818 CYP2T3P-201ENST00000601990 817 ntBASIC21.65■■□□□ 1.06
USP8P40818 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.65■■□□□ 1.06
USP8P40818 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
USP8P40818 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.65■■□□□ 1.06
USP8P40818 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP8P40818 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.64■■□□□ 1.06
USP8P40818 AC010980.2-201ENST00000587099 1412 ntBASIC21.64■■□□□ 1.06
USP8P40818 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP8P40818 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USP8P40818 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
USP8P40818 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.64■■□□□ 1.05
USP8P40818 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.64■■□□□ 1.05
USP8P40818 AC026185.1-201ENST00000445748 174 ntBASIC21.64■■□□□ 1.05
USP8P40818 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.64■■□□□ 1.05
USP8P40818 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
USP8P40818 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.64■■□□□ 1.05
USP8P40818 AFG3L1P-217ENST00000557444 2447 ntBASIC21.64■■□□□ 1.05
USP8P40818 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP8P40818 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.63■■□□□ 1.05
USP8P40818 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.63■■□□□ 1.05
USP8P40818 MIR663A-201ENST00000385250 93 ntBASIC21.63■■□□□ 1.05
USP8P40818 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.63■■□□□ 1.05
USP8P40818 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP8P40818 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.63■■□□□ 1.05
USP8P40818 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.63■■□□□ 1.05
USP8P40818 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USP8P40818 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
USP8P40818 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.62■■□□□ 1.05
USP8P40818 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.62■■□□□ 1.05
USP8P40818 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.62■■□□□ 1.05
USP8P40818 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.62■■□□□ 1.05
USP8P40818 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.62■■□□□ 1.05
USP8P40818 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP8P40818 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.61■■□□□ 1.05
USP8P40818 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.61■■□□□ 1.05
USP8P40818 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP8P40818 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.61■■□□□ 1.05
USP8P40818 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.61■■□□□ 1.05
USP8P40818 AC105020.6-201ENST00000621523 1217 ntBASIC21.61■■□□□ 1.05
USP8P40818 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.61■■□□□ 1.05
USP8P40818 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms