Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.02■□□□□ 0.96
CTNNA1P35221 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.02■□□□□ 0.96
CTNNA1P35221 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTNNA1P35221 AC013268.1-206ENST00000638368 961 ntBASIC21.02■□□□□ 0.96
CTNNA1P35221 AC112229.1-201ENST00000639295 961 ntBASIC21.02■□□□□ 0.96
CTNNA1P35221 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CTNNA1P35221 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTNNA1P35221 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTNNA1P35221 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CTNNA1P35221 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTNNA1P35221 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTNNA1P35221 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.01■□□□□ 0.95
CTNNA1P35221 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.01■□□□□ 0.95
CTNNA1P35221 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTNNA1P35221 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTNNA1P35221 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.01■□□□□ 0.95
CTNNA1P35221 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.01■□□□□ 0.95
CTNNA1P35221 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.01■□□□□ 0.95
CTNNA1P35221 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.01■□□□□ 0.95
CTNNA1P35221 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.01■□□□□ 0.95
CTNNA1P35221 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CTNNA1P35221 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTNNA1P35221 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.01■□□□□ 0.95
CTNNA1P35221 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CTNNA1P35221 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNNA1P35221 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.01■□□□□ 0.95
CTNNA1P35221 PTBP1P-201ENST00000554374 1601 ntBASIC21■□□□□ 0.95
CTNNA1P35221 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21■□□□□ 0.95
CTNNA1P35221 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21■□□□□ 0.95
CTNNA1P35221 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21■□□□□ 0.95
CTNNA1P35221 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CTNNA1P35221 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21■□□□□ 0.95
CTNNA1P35221 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21■□□□□ 0.95
CTNNA1P35221 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21■□□□□ 0.95
CTNNA1P35221 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21■□□□□ 0.95
CTNNA1P35221 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CTNNA1P35221 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CTNNA1P35221 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNNA1P35221 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.99■□□□□ 0.95
CTNNA1P35221 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 KRT18P11-201ENST00000435214 1283 ntBASIC20.99■□□□□ 0.95
CTNNA1P35221 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTNNA1P35221 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CTNNA1P35221 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTNNA1P35221 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CTNNA1P35221 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
CTNNA1P35221 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.98■□□□□ 0.95
CTNNA1P35221 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNNA1P35221 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms