Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC175P0C221 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCDC175P0C221 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
CCDC175P0C221 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC175P0C221 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC175P0C221 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L2-201ENST00000561772 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L6-201ENST00000626483 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L1-201ENST00000627662 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L8-201ENST00000629013 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L3-201ENST00000630187 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L7-201ENST00000630678 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 DUX4L5-201ENST00000630834 1275 ntBASIC21.49■■□□□ 1.03
CCDC175P0C221 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC175P0C221 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCDC175P0C221 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC175P0C221 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC175P0C221 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC175P0C221 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 MIR939-201ENST00000401314 82 ntBASIC21.48■■□□□ 1.03
CCDC175P0C221 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 AC091305.1-201ENST00000479476 895 ntBASIC21.48■■□□□ 1.03
CCDC175P0C221 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC175P0C221 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC175P0C221 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC175P0C221 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC175P0C221 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC175P0C221 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC175P0C221 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC175P0C221 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC175P0C221 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CCDC175P0C221 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC175P0C221 AF213884.3-201ENST00000563833 479 ntBASIC21.47■■□□□ 1.03
CCDC175P0C221 AC243732.1-201ENST00000612648 864 ntBASIC21.47■■□□□ 1.03
CCDC175P0C221 AC106739.1-201ENST00000617035 715 ntBASIC21.47■■□□□ 1.03
CCDC175P0C221 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC175P0C221 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC175P0C221 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 AL032819.2-201ENST00000624543 2162 ntBASIC21.47■■□□□ 1.03
CCDC175P0C221 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCDC175P0C221 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC175P0C221 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC175P0C221 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CCDC175P0C221 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC175P0C221 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC175P0C221 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC175P0C221 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC175P0C221 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.45■■□□□ 1.03
CCDC175P0C221 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC175P0C221 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC175P0C221 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC175P0C221 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC175P0C221 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC175P0C221 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC175P0C221 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC175P0C221 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC175P0C221 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.45■■□□□ 1.02
CCDC175P0C221 AC096631.2-201ENST00000436136 790 ntBASIC21.45■■□□□ 1.02
CCDC175P0C221 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.45■■□□□ 1.02
CCDC175P0C221 AC105265.2-201ENST00000467189 838 ntBASIC21.45■■□□□ 1.02
CCDC175P0C221 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC175P0C221 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC175P0C221 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms