Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.23■□□□□ 0.51
P04436 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
P04436 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.23■□□□□ 0.51
P04436 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
P04436 AC124016.1-201ENST00000609552 612 ntBASIC18.23■□□□□ 0.51
P04436 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
P04436 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.22■□□□□ 0.51
P04436 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
P04436 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
P04436 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
P04436 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.22■□□□□ 0.51
P04436 AC133681.1-201ENST00000465482 601 ntBASIC18.22■□□□□ 0.51
P04436 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.22■□□□□ 0.51
P04436 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.22■□□□□ 0.51
P04436 AC110285.5-201ENST00000611501 352 ntBASIC18.22■□□□□ 0.51
P04436 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
P04436 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P04436 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
P04436 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
P04436 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.21■□□□□ 0.51
P04436 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
P04436 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.21■□□□□ 0.51
P04436 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.21■□□□□ 0.51
P04436 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.21■□□□□ 0.51
P04436 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.21■□□□□ 0.51
P04436 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
P04436 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.21■□□□□ 0.51
P04436 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
P04436 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.21■□□□□ 0.51
P04436 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
P04436 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
P04436 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.21■□□□□ 0.5
P04436 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
P04436 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.2■□□□□ 0.5
P04436 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
P04436 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 MIR718-201ENST00000390190 70 ntBASIC18.2■□□□□ 0.5
P04436 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.2■□□□□ 0.5
P04436 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.2■□□□□ 0.5
P04436 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
P04436 RPS2P4-201ENST00000476944 856 ntBASIC18.2■□□□□ 0.5
P04436 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.2■□□□□ 0.5
P04436 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.2■□□□□ 0.5
P04436 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.2■□□□□ 0.5
P04436 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.2■□□□□ 0.5
P04436 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 SMG8-203ENST00000578922 2178 ntBASIC18.2■□□□□ 0.5
P04436 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04436 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.2■□□□□ 0.5
P04436 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
P04436 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.19■□□□□ 0.5
P04436 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
P04436 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.19■□□□□ 0.5
P04436 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.19■□□□□ 0.5
P04436 AC008550.1-201ENST00000511500 884 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms