Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRAP01903 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DRAP01903 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HLA-DRAP01903 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DRAP01903 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DRAP01903 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DRAP01903 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.47■■□□□ 1.03
HLA-DRAP01903 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRAP01903 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
HLA-DRAP01903 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DRAP01903 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DRAP01903 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 SOX15-203ENST00000570788 1093 ntBASIC21.46■■□□□ 1.03
HLA-DRAP01903 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DRAP01903 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 UNC93B5-201ENST00000530315 699 ntBASIC21.45■■□□□ 1.02
HLA-DRAP01903 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DRAP01903 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRAP01903 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.44■■□□□ 1.02
HLA-DRAP01903 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRAP01903 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms