Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC104187.1-201ENST00000607510 612 ntBASIC20.61■□□□□ 0.89
SRRM3A6NNA2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.61■□□□□ 0.89
SRRM3A6NNA2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 MIPEPP3-201ENST00000412105 444 ntBASIC20.6■□□□□ 0.89
SRRM3A6NNA2 CNN2P6-201ENST00000439038 900 ntBASIC20.6■□□□□ 0.89
SRRM3A6NNA2 AC008550.1-201ENST00000511500 884 ntBASIC20.6■□□□□ 0.89
SRRM3A6NNA2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM3A6NNA2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 AC005082.1-201ENST00000413042 2259 ntBASIC20.59■□□□□ 0.89
SRRM3A6NNA2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 AC128676.1-201ENST00000454392 318 ntBASIC20.59■□□□□ 0.89
SRRM3A6NNA2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM3A6NNA2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 AC093503.3-201ENST00000624917 2352 ntBASIC20.58■□□□□ 0.89
SRRM3A6NNA2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM3A6NNA2 MYCNOS-205ENST00000641950 531 ntBASIC20.58■□□□□ 0.89
SRRM3A6NNA2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
SRRM3A6NNA2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 AC211429.1-201ENST00000415277 523 ntBASIC20.57■□□□□ 0.88
SRRM3A6NNA2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRRM3A6NNA2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms