Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14□□□□□ -0.17
TRAV12-1A0A0B4J245 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 AC020763.4-201ENST00000623414 4170 ntBASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 SMUG1P1-201ENST00000590640 811 ntBASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-1A0A0B4J245 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 TSPY13P-201ENST00000338964 914 ntBASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 KRT125P-201ENST00000546827 989 ntBASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 LTB4R2-202ENST00000528054 3092 ntBASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-1A0A0B4J245 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV12-1A0A0B4J245 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms