Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA9Q9Y5H5 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDHA9Q9Y5H5 AC010864.1-201ENST00000609407 1511 ntBASIC24.91■■□□□ 1.58
PCDHA9Q9Y5H5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDHA9Q9Y5H5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA9Q9Y5H5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA9Q9Y5H5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA9Q9Y5H5 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.88■■□□□ 1.57
PCDHA9Q9Y5H5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA9Q9Y5H5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHA9Q9Y5H5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA9Q9Y5H5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA9Q9Y5H5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA9Q9Y5H5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA9Q9Y5H5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA9Q9Y5H5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA9Q9Y5H5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA9Q9Y5H5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA9Q9Y5H5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
PCDHA9Q9Y5H5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA9Q9Y5H5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA9Q9Y5H5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA9Q9Y5H5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA9Q9Y5H5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA9Q9Y5H5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA9Q9Y5H5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 AC005559.1-201ENST00000589661 871 ntBASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 AL121749.1-202ENST00000609313 2153 ntBASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA9Q9Y5H5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA9Q9Y5H5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA9Q9Y5H5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
PCDHA9Q9Y5H5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA9Q9Y5H5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHA9Q9Y5H5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA9Q9Y5H5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA9Q9Y5H5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDHA9Q9Y5H5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHA9Q9Y5H5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA9Q9Y5H5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
PCDHA9Q9Y5H5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA9Q9Y5H5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
PCDHA9Q9Y5H5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA9Q9Y5H5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA9Q9Y5H5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA9Q9Y5H5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA9Q9Y5H5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA9Q9Y5H5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA9Q9Y5H5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA9Q9Y5H5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA9Q9Y5H5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDHA9Q9Y5H5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA9Q9Y5H5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA9Q9Y5H5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA9Q9Y5H5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA9Q9Y5H5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA9Q9Y5H5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.71■■□□□ 1.55
PCDHA9Q9Y5H5 DUX4L28-201ENST00000623687 678 ntBASIC24.71■■□□□ 1.55
PCDHA9Q9Y5H5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.7■■□□□ 1.55
PCDHA9Q9Y5H5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA9Q9Y5H5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
PCDHA9Q9Y5H5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA9Q9Y5H5 AP006261.1-201ENST00000584783 668 ntBASIC24.7■■□□□ 1.54
PCDHA9Q9Y5H5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.7■■□□□ 1.54
PCDHA9Q9Y5H5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 MIR3665-201ENST00000578708 105 ntBASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA9Q9Y5H5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA9Q9Y5H5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA9Q9Y5H5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA9Q9Y5H5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA9Q9Y5H5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHA9Q9Y5H5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA9Q9Y5H5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA9Q9Y5H5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA9Q9Y5H5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms