Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDHGC4Q9Y5F7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHGC4Q9Y5F7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHGC4Q9Y5F7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGC4Q9Y5F7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDHGC4Q9Y5F7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGC4Q9Y5F7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
PCDHGC4Q9Y5F7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PCDHGC4Q9Y5F7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGC4Q9Y5F7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHGC4Q9Y5F7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGC4Q9Y5F7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGC4Q9Y5F7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDHGC4Q9Y5F7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PCDHGC4Q9Y5F7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGC4Q9Y5F7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGC4Q9Y5F7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGC4Q9Y5F7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC4Q9Y5F7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC4Q9Y5F7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 ABHD17AP4-201ENST00000411545 909 ntBASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PCDHGC4Q9Y5F7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGC4Q9Y5F7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.2■■□□□ 1.79
PCDHGC4Q9Y5F7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHGC4Q9Y5F7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHGC4Q9Y5F7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
PCDHGC4Q9Y5F7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHGC4Q9Y5F7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGC4Q9Y5F7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGC4Q9Y5F7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 AC139426.1-201ENST00000568218 2529 ntBASIC26.18■■□□□ 1.78
PCDHGC4Q9Y5F7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC4Q9Y5F7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC4Q9Y5F7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC4Q9Y5F7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 ABCB10P3-201ENST00000561950 2166 ntBASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC4Q9Y5F7 AL139393.2-201ENST00000608721 2025 ntBASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 ZNRF2P2-203ENST00000454624 420 ntBASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
PCDHGC4Q9Y5F7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PCDHGC4Q9Y5F7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.13■■□□□ 1.77
PCDHGC4Q9Y5F7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGC4Q9Y5F7 LINC00273-201ENST00000539813 1452 ntBASIC26.12■■□□□ 1.77
PCDHGC4Q9Y5F7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHGC4Q9Y5F7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGC4Q9Y5F7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGC4Q9Y5F7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGC4Q9Y5F7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHGC4Q9Y5F7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDHGC4Q9Y5F7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.1■■□□□ 1.77
PCDHGC4Q9Y5F7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGC4Q9Y5F7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHGC4Q9Y5F7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGC4Q9Y5F7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.08■■□□□ 1.77
PCDHGC4Q9Y5F7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDHGC4Q9Y5F7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGC4Q9Y5F7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.08■■□□□ 1.77
PCDHGC4Q9Y5F7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
PCDHGC4Q9Y5F7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
PCDHGC4Q9Y5F7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHGC4Q9Y5F7 AC135983.2-203ENST00000454486 1613 ntBASIC26.06■■□□□ 1.76
PCDHGC4Q9Y5F7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHGC4Q9Y5F7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
PCDHGC4Q9Y5F7 WHAMMP2-203ENST00000563942 1603 ntBASIC26.04■■□□□ 1.76
PCDHGC4Q9Y5F7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGC4Q9Y5F7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.03■■□□□ 1.76
PCDHGC4Q9Y5F7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC4Q9Y5F7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGC4Q9Y5F7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGC4Q9Y5F7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 MIR7108-201ENST00000614319 87 ntBASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGC4Q9Y5F7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms