Protein–RNA interactions for Protein: Q9Y572

RIPK3, Receptor-interacting serine/threonine-protein kinase 3, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3Q9Y572 LINC00273-201ENST00000539813 1452 ntBASIC30.05■■■□□ 2.4
RIPK3Q9Y572 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIPK3Q9Y572 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIPK3Q9Y572 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIPK3Q9Y572 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RIPK3Q9Y572 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RIPK3Q9Y572 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.02■■■□□ 2.4
RIPK3Q9Y572 HSD17B1P1-201ENST00000590052 955 ntBASIC30.02■■■□□ 2.4
RIPK3Q9Y572 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RIPK3Q9Y572 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RIPK3Q9Y572 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RIPK3Q9Y572 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
RIPK3Q9Y572 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
RIPK3Q9Y572 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RIPK3Q9Y572 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIPK3Q9Y572 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIPK3Q9Y572 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIPK3Q9Y572 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
RIPK3Q9Y572 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIPK3Q9Y572 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIPK3Q9Y572 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RIPK3Q9Y572 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.96■■■□□ 2.39
RIPK3Q9Y572 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RIPK3Q9Y572 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.96■■■□□ 2.39
RIPK3Q9Y572 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RIPK3Q9Y572 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.94■■■□□ 2.38
RIPK3Q9Y572 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.94■■■□□ 2.38
RIPK3Q9Y572 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.94■■■□□ 2.38
RIPK3Q9Y572 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RIPK3Q9Y572 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RIPK3Q9Y572 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
RIPK3Q9Y572 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.92■■■□□ 2.38
RIPK3Q9Y572 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RIPK3Q9Y572 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RIPK3Q9Y572 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.92■■■□□ 2.38
RIPK3Q9Y572 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
RIPK3Q9Y572 AC127502.1-201ENST00000399971 1502 ntBASIC29.91■■■□□ 2.38
RIPK3Q9Y572 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.91■■■□□ 2.38
RIPK3Q9Y572 AL135925.1-201ENST00000605920 1701 ntBASIC29.91■■■□□ 2.38
RIPK3Q9Y572 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.9■■■□□ 2.38
RIPK3Q9Y572 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RIPK3Q9Y572 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RIPK3Q9Y572 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.37
RIPK3Q9Y572 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.88■■■□□ 2.37
RIPK3Q9Y572 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
RIPK3Q9Y572 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.87■■■□□ 2.37
RIPK3Q9Y572 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RIPK3Q9Y572 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RIPK3Q9Y572 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RIPK3Q9Y572 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.84■■■□□ 2.37
RIPK3Q9Y572 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.84■■■□□ 2.37
RIPK3Q9Y572 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RIPK3Q9Y572 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
RIPK3Q9Y572 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RIPK3Q9Y572 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.81■■■□□ 2.36
RIPK3Q9Y572 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
RIPK3Q9Y572 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.8■■■□□ 2.36
RIPK3Q9Y572 WHAMMP2-203ENST00000563942 1603 ntBASIC29.8■■■□□ 2.36
RIPK3Q9Y572 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.79■■■□□ 2.36
RIPK3Q9Y572 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RIPK3Q9Y572 AC135983.2-203ENST00000454486 1613 ntBASIC29.79■■■□□ 2.36
RIPK3Q9Y572 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.79■■■□□ 2.36
RIPK3Q9Y572 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RIPK3Q9Y572 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RIPK3Q9Y572 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
RIPK3Q9Y572 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RIPK3Q9Y572 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RIPK3Q9Y572 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RIPK3Q9Y572 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
RIPK3Q9Y572 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
RIPK3Q9Y572 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RIPK3Q9Y572 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.73■■■□□ 2.35
RIPK3Q9Y572 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.72■■■□□ 2.35
RIPK3Q9Y572 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
RIPK3Q9Y572 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.72■■■□□ 2.35
RIPK3Q9Y572 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RIPK3Q9Y572 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
RIPK3Q9Y572 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RIPK3Q9Y572 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RIPK3Q9Y572 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RIPK3Q9Y572 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.7■■■□□ 2.35
RIPK3Q9Y572 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RIPK3Q9Y572 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
RIPK3Q9Y572 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
RIPK3Q9Y572 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
RIPK3Q9Y572 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RIPK3Q9Y572 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.69■■■□□ 2.34
RIPK3Q9Y572 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms