Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NCKAP1Q9Y2A7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NCKAP1Q9Y2A7 LINC00273-201ENST00000539813 1452 ntBASIC26.18■■□□□ 1.78
NCKAP1Q9Y2A7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.18■■□□□ 1.78
NCKAP1Q9Y2A7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCKAP1Q9Y2A7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
NCKAP1Q9Y2A7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.17■■□□□ 1.78
NCKAP1Q9Y2A7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.16■■□□□ 1.78
NCKAP1Q9Y2A7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NCKAP1Q9Y2A7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NCKAP1Q9Y2A7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.15■■□□□ 1.78
NCKAP1Q9Y2A7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCKAP1Q9Y2A7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.14■■□□□ 1.78
NCKAP1Q9Y2A7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NCKAP1Q9Y2A7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NCKAP1Q9Y2A7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.13■■□□□ 1.77
NCKAP1Q9Y2A7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.12■■□□□ 1.77
NCKAP1Q9Y2A7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCKAP1Q9Y2A7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.11■■□□□ 1.77
NCKAP1Q9Y2A7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NCKAP1Q9Y2A7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NCKAP1Q9Y2A7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.09■■□□□ 1.77
NCKAP1Q9Y2A7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
NCKAP1Q9Y2A7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.07■■□□□ 1.76
NCKAP1Q9Y2A7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.07■■□□□ 1.76
NCKAP1Q9Y2A7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NCKAP1Q9Y2A7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NCKAP1Q9Y2A7 HSD17B1P1-201ENST00000590052 955 ntBASIC26.06■■□□□ 1.76
NCKAP1Q9Y2A7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NCKAP1Q9Y2A7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
NCKAP1Q9Y2A7 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.05■■□□□ 1.76
NCKAP1Q9Y2A7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NCKAP1Q9Y2A7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
NCKAP1Q9Y2A7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
NCKAP1Q9Y2A7 AC127502.1-201ENST00000399971 1502 ntBASIC26.03■■□□□ 1.76
NCKAP1Q9Y2A7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
NCKAP1Q9Y2A7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 AL135925.1-201ENST00000605920 1701 ntBASIC26.02■■□□□ 1.76
NCKAP1Q9Y2A7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
NCKAP1Q9Y2A7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.01■■□□□ 1.75
NCKAP1Q9Y2A7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NCKAP1Q9Y2A7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26■■□□□ 1.75
NCKAP1Q9Y2A7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NCKAP1Q9Y2A7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
NCKAP1Q9Y2A7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCKAP1Q9Y2A7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.96■■□□□ 1.75
NCKAP1Q9Y2A7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.96■■□□□ 1.75
NCKAP1Q9Y2A7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NCKAP1Q9Y2A7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NCKAP1Q9Y2A7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NCKAP1Q9Y2A7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NCKAP1Q9Y2A7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NCKAP1Q9Y2A7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NCKAP1Q9Y2A7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.93■■□□□ 1.74
NCKAP1Q9Y2A7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
NCKAP1Q9Y2A7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NCKAP1Q9Y2A7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
NCKAP1Q9Y2A7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.92■■□□□ 1.74
NCKAP1Q9Y2A7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
NCKAP1Q9Y2A7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
NCKAP1Q9Y2A7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NCKAP1Q9Y2A7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
NCKAP1Q9Y2A7 AC135983.2-203ENST00000454486 1613 ntBASIC25.91■■□□□ 1.74
NCKAP1Q9Y2A7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
NCKAP1Q9Y2A7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
NCKAP1Q9Y2A7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
NCKAP1Q9Y2A7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.89■■□□□ 1.74
NCKAP1Q9Y2A7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.89■■□□□ 1.74
NCKAP1Q9Y2A7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
NCKAP1Q9Y2A7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
NCKAP1Q9Y2A7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.88■■□□□ 1.73
NCKAP1Q9Y2A7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NCKAP1Q9Y2A7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NCKAP1Q9Y2A7 WHAMMP2-203ENST00000563942 1603 ntBASIC25.88■■□□□ 1.73
NCKAP1Q9Y2A7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NCKAP1Q9Y2A7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
NCKAP1Q9Y2A7 AC008813.1-201ENST00000536597 885 ntBASIC25.87■■□□□ 1.73
NCKAP1Q9Y2A7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
NCKAP1Q9Y2A7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
NCKAP1Q9Y2A7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms