Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA4Q9UN74 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.86■■■□□ 2.37
PCDHA4Q9UN74 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.86■■■□□ 2.37
PCDHA4Q9UN74 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA4Q9UN74 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA4Q9UN74 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.85■■■□□ 2.37
PCDHA4Q9UN74 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA4Q9UN74 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.81■■■□□ 2.36
PCDHA4Q9UN74 AL139393.2-201ENST00000608721 2025 ntBASIC29.8■■■□□ 2.36
PCDHA4Q9UN74 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
PCDHA4Q9UN74 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.79■■■□□ 2.36
PCDHA4Q9UN74 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHA4Q9UN74 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
PCDHA4Q9UN74 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHA4Q9UN74 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHA4Q9UN74 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
PCDHA4Q9UN74 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
PCDHA4Q9UN74 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDHA4Q9UN74 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDHA4Q9UN74 AC139426.1-201ENST00000568218 2529 ntBASIC29.75■■■□□ 2.35
PCDHA4Q9UN74 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHA4Q9UN74 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDHA4Q9UN74 AC021231.2-201ENST00000594613 730 ntBASIC29.73■■■□□ 2.35
PCDHA4Q9UN74 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.73■■■□□ 2.35
PCDHA4Q9UN74 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHA4Q9UN74 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHA4Q9UN74 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHA4Q9UN74 DUX4L29-201ENST00000425409 679 ntBASIC29.72■■■□□ 2.35
PCDHA4Q9UN74 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHA4Q9UN74 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHA4Q9UN74 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
PCDHA4Q9UN74 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHA4Q9UN74 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.71■■■□□ 2.35
PCDHA4Q9UN74 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHA4Q9UN74 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHA4Q9UN74 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.7■■■□□ 2.35
PCDHA4Q9UN74 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
PCDHA4Q9UN74 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHA4Q9UN74 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.69■■■□□ 2.34
PCDHA4Q9UN74 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHA4Q9UN74 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHA4Q9UN74 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHA4Q9UN74 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.68■■■□□ 2.34
PCDHA4Q9UN74 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHA4Q9UN74 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHA4Q9UN74 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.67■■■□□ 2.34
PCDHA4Q9UN74 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.67■■■□□ 2.34
PCDHA4Q9UN74 LINC00273-201ENST00000539813 1452 ntBASIC29.67■■■□□ 2.34
PCDHA4Q9UN74 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHA4Q9UN74 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.66■■■□□ 2.34
PCDHA4Q9UN74 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHA4Q9UN74 AP004833.2-201ENST00000532228 1454 ntBASIC29.66■■■□□ 2.34
PCDHA4Q9UN74 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
PCDHA4Q9UN74 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
PCDHA4Q9UN74 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.65■■■□□ 2.34
PCDHA4Q9UN74 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA4Q9UN74 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA4Q9UN74 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.64■■■□□ 2.34
PCDHA4Q9UN74 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
PCDHA4Q9UN74 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
PCDHA4Q9UN74 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHA4Q9UN74 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.63■■■□□ 2.33
PCDHA4Q9UN74 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHA4Q9UN74 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
PCDHA4Q9UN74 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHA4Q9UN74 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHA4Q9UN74 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHA4Q9UN74 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
PCDHA4Q9UN74 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHA4Q9UN74 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHA4Q9UN74 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.61■■■□□ 2.33
PCDHA4Q9UN74 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHA4Q9UN74 AC135983.2-203ENST00000454486 1613 ntBASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHA4Q9UN74 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.59■■■□□ 2.33
PCDHA4Q9UN74 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.59■■■□□ 2.33
PCDHA4Q9UN74 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.59■■■□□ 2.33
PCDHA4Q9UN74 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.59■■■□□ 2.33
PCDHA4Q9UN74 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCDHA4Q9UN74 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCDHA4Q9UN74 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
PCDHA4Q9UN74 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.56■■■□□ 2.32
PCDHA4Q9UN74 WHAMMP2-203ENST00000563942 1603 ntBASIC29.56■■■□□ 2.32
PCDHA4Q9UN74 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.55■■■□□ 2.32
PCDHA4Q9UN74 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.55■■■□□ 2.32
PCDHA4Q9UN74 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHA4Q9UN74 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHA4Q9UN74 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHA4Q9UN74 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms