Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PPP4R1LQ9P1A2 AC021231.2-201ENST00000594613 730 ntBASIC23.75■■□□□ 1.39
PPP4R1LQ9P1A2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP4R1LQ9P1A2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPP4R1LQ9P1A2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PPP4R1LQ9P1A2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1LQ9P1A2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.72■■□□□ 1.39
PPP4R1LQ9P1A2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPP4R1LQ9P1A2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PPP4R1LQ9P1A2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1LQ9P1A2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1LQ9P1A2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1LQ9P1A2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1LQ9P1A2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PPP4R1LQ9P1A2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1LQ9P1A2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1LQ9P1A2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPP4R1LQ9P1A2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PPP4R1LQ9P1A2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PPP4R1LQ9P1A2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.67■■□□□ 1.38
PPP4R1LQ9P1A2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PPP4R1LQ9P1A2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPP4R1LQ9P1A2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PPP4R1LQ9P1A2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1LQ9P1A2 ABHD17AP4-201ENST00000411545 909 ntBASIC23.65■■□□□ 1.38
PPP4R1LQ9P1A2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1LQ9P1A2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPP4R1LQ9P1A2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PPP4R1LQ9P1A2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1LQ9P1A2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.64■■□□□ 1.37
PPP4R1LQ9P1A2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PPP4R1LQ9P1A2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PPP4R1LQ9P1A2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1LQ9P1A2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1LQ9P1A2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1LQ9P1A2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PPP4R1LQ9P1A2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 LINC00273-201ENST00000539813 1452 ntBASIC23.62■■□□□ 1.37
PPP4R1LQ9P1A2 ZNRF2P2-203ENST00000454624 420 ntBASIC23.61■■□□□ 1.37
PPP4R1LQ9P1A2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.61■■□□□ 1.37
PPP4R1LQ9P1A2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.61■■□□□ 1.37
PPP4R1LQ9P1A2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PPP4R1LQ9P1A2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PPP4R1LQ9P1A2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R1LQ9P1A2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PPP4R1LQ9P1A2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PPP4R1LQ9P1A2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.57■■□□□ 1.36
PPP4R1LQ9P1A2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R1LQ9P1A2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.56■■□□□ 1.36
PPP4R1LQ9P1A2 AL139393.2-201ENST00000608721 2025 ntBASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R1LQ9P1A2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R1LQ9P1A2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP4R1LQ9P1A2 AC135983.2-203ENST00000454486 1613 ntBASIC23.52■■□□□ 1.36
PPP4R1LQ9P1A2 LINC01971-201ENST00000617888 1048 ntBASIC23.52■■□□□ 1.36
PPP4R1LQ9P1A2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PPP4R1LQ9P1A2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 AP004833.2-201ENST00000532228 1454 ntBASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 ABCB10P3-201ENST00000561950 2166 ntBASIC23.51■■□□□ 1.35
PPP4R1LQ9P1A2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PPP4R1LQ9P1A2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.5■■□□□ 1.35
PPP4R1LQ9P1A2 MIR7108-201ENST00000614319 87 ntBASIC23.5■■□□□ 1.35
PPP4R1LQ9P1A2 WHAMMP2-203ENST00000563942 1603 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms