Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM2Q9C040 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM2Q9C040 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM2Q9C040 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM2Q9C040 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRIM2Q9C040 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM2Q9C040 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 AP006261.1-201ENST00000584783 668 ntBASIC23.73■■□□□ 1.39
TRIM2Q9C040 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM2Q9C040 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM2Q9C040 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM2Q9C040 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM2Q9C040 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.71■■□□□ 1.39
TRIM2Q9C040 AL162393.1-201ENST00000437852 946 ntBASIC23.71■■□□□ 1.39
TRIM2Q9C040 AP004833.2-201ENST00000532228 1454 ntBASIC23.7■■□□□ 1.38
TRIM2Q9C040 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 AC142086.6-201ENST00000621154 1765 ntBASIC23.7■■□□□ 1.38
TRIM2Q9C040 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM2Q9C040 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC005559.1-201ENST00000589661 871 ntBASIC23.69■■□□□ 1.38
TRIM2Q9C040 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC127502.1-201ENST00000399971 1502 ntBASIC23.69■■□□□ 1.38
TRIM2Q9C040 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM2Q9C040 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM2Q9C040 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM2Q9C040 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM2Q9C040 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.65■■□□□ 1.38
TRIM2Q9C040 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM2Q9C040 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM2Q9C040 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM2Q9C040 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM2Q9C040 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM2Q9C040 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM2Q9C040 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM2Q9C040 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TRIM2Q9C040 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM2Q9C040 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 DRD5P2-201ENST00000421395 2012 ntBASIC23.62■■□□□ 1.37
TRIM2Q9C040 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM2Q9C040 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM2Q9C040 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM2Q9C040 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM2Q9C040 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRIM2Q9C040 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TRIM2Q9C040 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM2Q9C040 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
TRIM2Q9C040 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM2Q9C040 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM2Q9C040 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM2Q9C040 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 MIR3665-201ENST00000578708 105 ntBASIC23.57■■□□□ 1.36
TRIM2Q9C040 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM2Q9C040 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM2Q9C040 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM2Q9C040 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM2Q9C040 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM2Q9C040 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM2Q9C040 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 AC108673.1-201ENST00000510422 1159 ntBASIC23.54■■□□□ 1.36
TRIM2Q9C040 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM2Q9C040 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM2Q9C040 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM2Q9C040 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TRIM2Q9C040 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 DUX4L28-201ENST00000623687 678 ntBASIC23.52■■□□□ 1.36
TRIM2Q9C040 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM2Q9C040 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms