Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.81□□□□□ -0.2
KRTAP4-1Q9BYQ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 GPX1-201ENST00000419349 1106 ntBASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRTAP4-1Q9BYQ7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRTAP4-1Q9BYQ7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRTAP4-1Q9BYQ7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KRTAP4-1Q9BYQ7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRTAP4-1Q9BYQ7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRTAP4-1Q9BYQ7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.78□□□□□ -0.2
KRTAP4-1Q9BYQ7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.78□□□□□ -0.2
KRTAP4-1Q9BYQ7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KRTAP4-1Q9BYQ7 LINC00273-201ENST00000539813 1452 ntBASIC13.77□□□□□ -0.21
KRTAP4-1Q9BYQ7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC13.77□□□□□ -0.21
KRTAP4-1Q9BYQ7 ABHD17AP5-201ENST00000580133 923 ntBASIC13.77□□□□□ -0.21
KRTAP4-1Q9BYQ7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP4-1Q9BYQ7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
KRTAP4-1Q9BYQ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KRTAP4-1Q9BYQ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.75□□□□□ -0.21
KRTAP4-1Q9BYQ7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRTAP4-1Q9BYQ7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
KRTAP4-1Q9BYQ7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRTAP4-1Q9BYQ7 RNF126P1-201ENST00000567452 1320 ntBASIC13.73□□□□□ -0.21
KRTAP4-1Q9BYQ7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP4-1Q9BYQ7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP4-1Q9BYQ7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRTAP4-1Q9BYQ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 AC010864.1-201ENST00000609407 1511 ntBASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP4-1Q9BYQ7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC13.71□□□□□ -0.21
KRTAP4-1Q9BYQ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.71□□□□□ -0.21
KRTAP4-1Q9BYQ7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KRTAP4-1Q9BYQ7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP4-1Q9BYQ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC13.7□□□□□ -0.22
KRTAP4-1Q9BYQ7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
KRTAP4-1Q9BYQ7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
KRTAP4-1Q9BYQ7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP4-1Q9BYQ7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
KRTAP4-1Q9BYQ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.68□□□□□ -0.22
KRTAP4-1Q9BYQ7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP4-1Q9BYQ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP4-1Q9BYQ7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 AC022413.1-201ENST00000624602 984 ntBASIC13.67□□□□□ -0.22
KRTAP4-1Q9BYQ7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP4-1Q9BYQ7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP4-1Q9BYQ7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP4-1Q9BYQ7 WHAMMP2-203ENST00000563942 1603 ntBASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 NTF6A-201ENST00000591175 560 ntBASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP4-1Q9BYQ7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 AC127502.1-201ENST00000399971 1502 ntBASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP4-1Q9BYQ7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP4-1Q9BYQ7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms