Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL8AQ9BWD3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.17■■□□□ 1.14
RTL8AQ9BWD3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL8AQ9BWD3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL8AQ9BWD3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.16■■□□□ 1.14
RTL8AQ9BWD3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTL8AQ9BWD3 AC108673.1-201ENST00000510422 1159 ntBASIC22.15■■□□□ 1.14
RTL8AQ9BWD3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.14■■□□□ 1.13
RTL8AQ9BWD3 AC127502.1-201ENST00000399971 1502 ntBASIC22.14■■□□□ 1.13
RTL8AQ9BWD3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTL8AQ9BWD3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.12■■□□□ 1.13
RTL8AQ9BWD3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.12■■□□□ 1.13
RTL8AQ9BWD3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTL8AQ9BWD3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL8AQ9BWD3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.11■■□□□ 1.13
RTL8AQ9BWD3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL8AQ9BWD3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTL8AQ9BWD3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL8AQ9BWD3 AL162393.1-201ENST00000437852 946 ntBASIC22.1■■□□□ 1.13
RTL8AQ9BWD3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RTL8AQ9BWD3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTL8AQ9BWD3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RTL8AQ9BWD3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL8AQ9BWD3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL8AQ9BWD3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.08■■□□□ 1.13
RTL8AQ9BWD3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL8AQ9BWD3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL8AQ9BWD3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL8AQ9BWD3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTL8AQ9BWD3 AP004833.2-201ENST00000532228 1454 ntBASIC22.07■■□□□ 1.12
RTL8AQ9BWD3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 AC087741.3-201ENST00000624270 1347 ntBASIC22.06■■□□□ 1.12
RTL8AQ9BWD3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTL8AQ9BWD3 AC044849.2-201ENST00000606596 710 ntBASIC22.04■■□□□ 1.12
RTL8AQ9BWD3 MIR6090-201ENST00000622481 60 ntBASIC22.04■■□□□ 1.12
RTL8AQ9BWD3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.04■■□□□ 1.12
RTL8AQ9BWD3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.03■■□□□ 1.12
RTL8AQ9BWD3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.03■■□□□ 1.12
RTL8AQ9BWD3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTL8AQ9BWD3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
RTL8AQ9BWD3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTL8AQ9BWD3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTL8AQ9BWD3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.02■■□□□ 1.12
RTL8AQ9BWD3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL8AQ9BWD3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.01■■□□□ 1.11
RTL8AQ9BWD3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.01■■□□□ 1.11
RTL8AQ9BWD3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTL8AQ9BWD3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTL8AQ9BWD3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL8AQ9BWD3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTL8AQ9BWD3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.99■■□□□ 1.11
RTL8AQ9BWD3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL8AQ9BWD3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL8AQ9BWD3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.98■■□□□ 1.11
RTL8AQ9BWD3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.98■■□□□ 1.11
RTL8AQ9BWD3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTL8AQ9BWD3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RTL8AQ9BWD3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTL8AQ9BWD3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTL8AQ9BWD3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL8AQ9BWD3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RTL8AQ9BWD3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTL8AQ9BWD3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RTL8AQ9BWD3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RTL8AQ9BWD3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
RTL8AQ9BWD3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL8AQ9BWD3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.94■■□□□ 1.1
RTL8AQ9BWD3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.94■■□□□ 1.1
RTL8AQ9BWD3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.93■■□□□ 1.1
RTL8AQ9BWD3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTL8AQ9BWD3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RTL8AQ9BWD3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL8AQ9BWD3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTL8AQ9BWD3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.92■■□□□ 1.1
RTL8AQ9BWD3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.92■■□□□ 1.1
RTL8AQ9BWD3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTL8AQ9BWD3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL8AQ9BWD3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL8AQ9BWD3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTL8AQ9BWD3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL8AQ9BWD3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL8AQ9BWD3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.89■■□□□ 1.09
RTL8AQ9BWD3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms