Protein–RNA interactions for Protein: Q96PM5

RCHY1, RING finger and CHY zinc finger domain-containing protein 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCHY1Q96PM5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.96■□□□□ 0.79
RCHY1Q96PM5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCHY1Q96PM5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCHY1Q96PM5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCHY1Q96PM5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.95■□□□□ 0.78
RCHY1Q96PM5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RCHY1Q96PM5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCHY1Q96PM5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCHY1Q96PM5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCHY1Q96PM5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.93■□□□□ 0.78
RCHY1Q96PM5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.93■□□□□ 0.78
RCHY1Q96PM5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.93■□□□□ 0.78
RCHY1Q96PM5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCHY1Q96PM5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCHY1Q96PM5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCHY1Q96PM5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RCHY1Q96PM5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RCHY1Q96PM5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCHY1Q96PM5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RCHY1Q96PM5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RCHY1Q96PM5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCHY1Q96PM5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCHY1Q96PM5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCHY1Q96PM5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.89■□□□□ 0.77
RCHY1Q96PM5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCHY1Q96PM5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCHY1Q96PM5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCHY1Q96PM5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCHY1Q96PM5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RCHY1Q96PM5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.86■□□□□ 0.77
RCHY1Q96PM5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RCHY1Q96PM5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RCHY1Q96PM5 WASH5P-204ENST00000632292 975 ntBASIC19.85■□□□□ 0.77
RCHY1Q96PM5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RCHY1Q96PM5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RCHY1Q96PM5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCHY1Q96PM5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.84■□□□□ 0.77
RCHY1Q96PM5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.84■□□□□ 0.77
RCHY1Q96PM5 ST7-AS1-201ENST00000456775 1889 ntBASIC19.84■□□□□ 0.77
RCHY1Q96PM5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RCHY1Q96PM5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RCHY1Q96PM5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.83■□□□□ 0.77
RCHY1Q96PM5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
RCHY1Q96PM5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCHY1Q96PM5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCHY1Q96PM5 AL121749.1-202ENST00000609313 2153 ntBASIC19.83■□□□□ 0.76
RCHY1Q96PM5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.82■□□□□ 0.76
RCHY1Q96PM5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.82■□□□□ 0.76
RCHY1Q96PM5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCHY1Q96PM5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
RCHY1Q96PM5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCHY1Q96PM5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCHY1Q96PM5 DUX4L29-201ENST00000425409 679 ntBASIC19.81■□□□□ 0.76
RCHY1Q96PM5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
RCHY1Q96PM5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCHY1Q96PM5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCHY1Q96PM5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCHY1Q96PM5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RCHY1Q96PM5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCHY1Q96PM5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.77■□□□□ 0.76
RCHY1Q96PM5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.77■□□□□ 0.76
RCHY1Q96PM5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCHY1Q96PM5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCHY1Q96PM5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCHY1Q96PM5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RCHY1Q96PM5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms