Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
LRCH3Q96II8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LRCH3Q96II8 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.69■■■□□ 2.18
LRCH3Q96II8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.69■■■□□ 2.18
LRCH3Q96II8 AL035685.1-201ENST00000636663 812 ntBASIC28.69■■■□□ 2.18
LRCH3Q96II8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LRCH3Q96II8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
LRCH3Q96II8 MIR935-201ENST00000401179 91 ntBASIC28.67■■■□□ 2.18
LRCH3Q96II8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
LRCH3Q96II8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.65■■■□□ 2.18
LRCH3Q96II8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
LRCH3Q96II8 KRT18P60-201ENST00000312876 1297 ntBASIC28.63■■■□□ 2.17
LRCH3Q96II8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.62■■■□□ 2.17
LRCH3Q96II8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
LRCH3Q96II8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LRCH3Q96II8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.61■■■□□ 2.17
LRCH3Q96II8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LRCH3Q96II8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
LRCH3Q96II8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.6■■■□□ 2.17
LRCH3Q96II8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
LRCH3Q96II8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
LRCH3Q96II8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
LRCH3Q96II8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.58■■■□□ 2.17
LRCH3Q96II8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.58■■■□□ 2.17
LRCH3Q96II8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LRCH3Q96II8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.57■■■□□ 2.16
LRCH3Q96II8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
LRCH3Q96II8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
LRCH3Q96II8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
LRCH3Q96II8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.55■■■□□ 2.16
LRCH3Q96II8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LRCH3Q96II8 AL451085.2-201ENST00000605085 799 ntBASIC28.54■■■□□ 2.16
LRCH3Q96II8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
LRCH3Q96II8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
LRCH3Q96II8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
LRCH3Q96II8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.52■■■□□ 2.16
LRCH3Q96II8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
LRCH3Q96II8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
LRCH3Q96II8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
LRCH3Q96II8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
LRCH3Q96II8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
LRCH3Q96II8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
LRCH3Q96II8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
LRCH3Q96II8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.5■■■□□ 2.15
LRCH3Q96II8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
LRCH3Q96II8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
LRCH3Q96II8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
LRCH3Q96II8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
LRCH3Q96II8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.48■■■□□ 2.15
LRCH3Q96II8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
LRCH3Q96II8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
LRCH3Q96II8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LRCH3Q96II8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.46■■■□□ 2.15
LRCH3Q96II8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.15
LRCH3Q96II8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LRCH3Q96II8 AC131212.1-201ENST00000613771 668 ntBASIC28.45■■■□□ 2.14
LRCH3Q96II8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
LRCH3Q96II8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.43■■■□□ 2.14
LRCH3Q96II8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LRCH3Q96II8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.43■■■□□ 2.14
LRCH3Q96II8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.43■■■□□ 2.14
LRCH3Q96II8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LRCH3Q96II8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
LRCH3Q96II8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LRCH3Q96II8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.41■■■□□ 2.14
LRCH3Q96II8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
LRCH3Q96II8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.4■■■□□ 2.14
LRCH3Q96II8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.4■■■□□ 2.14
LRCH3Q96II8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.39■■■□□ 2.14
LRCH3Q96II8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
LRCH3Q96II8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.39■■■□□ 2.14
LRCH3Q96II8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.39■■■□□ 2.13
LRCH3Q96II8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LRCH3Q96II8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.38■■■□□ 2.13
LRCH3Q96II8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.37■■■□□ 2.13
LRCH3Q96II8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
LRCH3Q96II8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.36■■■□□ 2.13
LRCH3Q96II8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.36■■■□□ 2.13
LRCH3Q96II8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LRCH3Q96II8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LRCH3Q96II8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LRCH3Q96II8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
LRCH3Q96II8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.35■■■□□ 2.13
LRCH3Q96II8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LRCH3Q96II8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LRCH3Q96II8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
LRCH3Q96II8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.33■■■□□ 2.13
LRCH3Q96II8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
LRCH3Q96II8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LRCH3Q96II8 AC060814.1-201ENST00000554326 538 ntBASIC28.32■■■□□ 2.12
LRCH3Q96II8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.31■■■□□ 2.12
LRCH3Q96II8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.31■■■□□ 2.12
LRCH3Q96II8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.31■■■□□ 2.12
LRCH3Q96II8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LRCH3Q96II8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
LRCH3Q96II8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LRCH3Q96II8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.3■■■□□ 2.12
LRCH3Q96II8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.3■■■□□ 2.12
LRCH3Q96II8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
LRCH3Q96II8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms