Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TIMD4Q96H15 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.8■■□□□ 1.08
TIMD4Q96H15 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TIMD4Q96H15 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIMD4Q96H15 LINC00273-201ENST00000539813 1452 ntBASIC21.79■■□□□ 1.08
TIMD4Q96H15 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TIMD4Q96H15 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.79■■□□□ 1.08
TIMD4Q96H15 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.79■■□□□ 1.08
TIMD4Q96H15 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMD4Q96H15 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TIMD4Q96H15 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.78■■□□□ 1.08
TIMD4Q96H15 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.78■■□□□ 1.08
TIMD4Q96H15 MIR3648-2-201ENST00000581792 180 ntBASIC21.78■■□□□ 1.08
TIMD4Q96H15 MIR3648-1-201ENST00000615959 180 ntBASIC21.78■■□□□ 1.08
TIMD4Q96H15 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TIMD4Q96H15 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIMD4Q96H15 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIMD4Q96H15 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.77■■□□□ 1.08
TIMD4Q96H15 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.77■■□□□ 1.08
TIMD4Q96H15 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TIMD4Q96H15 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TIMD4Q96H15 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMD4Q96H15 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIMD4Q96H15 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIMD4Q96H15 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIMD4Q96H15 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.76■■□□□ 1.07
TIMD4Q96H15 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMD4Q96H15 AC127502.1-201ENST00000399971 1502 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L13-201ENST00000554103 1267 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.75■■□□□ 1.07
TIMD4Q96H15 AC016575.1-201ENST00000607026 382 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L15-201ENST00000611059 1267 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L23-201ENST00000615195 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L24-201ENST00000617576 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L22-201ENST00000618238 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L20-201ENST00000619712 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L21-201ENST00000622058 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L10-201ENST00000622460 1267 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 DUX4L25-201ENST00000624915 1269 ntBASIC21.75■■□□□ 1.07
TIMD4Q96H15 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMD4Q96H15 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMD4Q96H15 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMD4Q96H15 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIMD4Q96H15 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TIMD4Q96H15 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TIMD4Q96H15 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TIMD4Q96H15 MIR639-201ENST00000384974 98 ntBASIC21.73■■□□□ 1.07
TIMD4Q96H15 CR559946.2-201ENST00000623684 991 ntBASIC21.73■■□□□ 1.07
TIMD4Q96H15 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.73■■□□□ 1.07
TIMD4Q96H15 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMD4Q96H15 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMD4Q96H15 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMD4Q96H15 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TIMD4Q96H15 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMD4Q96H15 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TIMD4Q96H15 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.07
TIMD4Q96H15 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.7■■□□□ 1.07
TIMD4Q96H15 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMD4Q96H15 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TIMD4Q96H15 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.69■■□□□ 1.06
TIMD4Q96H15 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.68■■□□□ 1.06
TIMD4Q96H15 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TIMD4Q96H15 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TIMD4Q96H15 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.67■■□□□ 1.06
TIMD4Q96H15 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TIMD4Q96H15 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMD4Q96H15 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.67■■□□□ 1.06
TIMD4Q96H15 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TIMD4Q96H15 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TIMD4Q96H15 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.66■■□□□ 1.06
TIMD4Q96H15 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
TIMD4Q96H15 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TIMD4Q96H15 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMD4Q96H15 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMD4Q96H15 MIR4449-201ENST00000578365 66 ntBASIC21.65■■□□□ 1.06
TIMD4Q96H15 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TIMD4Q96H15 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMD4Q96H15 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.65■■□□□ 1.06
TIMD4Q96H15 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TIMD4Q96H15 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.64■■□□□ 1.05
TIMD4Q96H15 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TIMD4Q96H15 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.63■■□□□ 1.05
TIMD4Q96H15 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TIMD4Q96H15 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TIMD4Q96H15 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMD4Q96H15 ST7-AS1-201ENST00000456775 1889 ntBASIC21.61■■□□□ 1.05
TIMD4Q96H15 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMD4Q96H15 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.61■■□□□ 1.05
TIMD4Q96H15 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMD4Q96H15 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TIMD4Q96H15 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMD4Q96H15 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TIMD4Q96H15 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TIMD4Q96H15 AC135983.2-203ENST00000454486 1613 ntBASIC21.6■■□□□ 1.05
TIMD4Q96H15 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMD4Q96H15 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TIMD4Q96H15 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMD4Q96H15 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.59■■□□□ 1.05
TIMD4Q96H15 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
TIMD4Q96H15 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms